Gene Bamb_5009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5009 
Symbol 
ID4313900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2029696 
End bp2030166 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content67% 
IMG OID638152852 
ProductUspA domain-containing protein 
Protein accessionYP_776892 
Protein GI115359754 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACAAGC GCATTCTGGT TGCCATCGAC GGCAGCGACA CGTCCCGCCA CGCGTTCGAT 
GCCGCGCTCG CGCTCGCGAA GGAGCACGGT GCCGAACTGC AACCGTTCTA CGTCGTCGAG
AACGCCGCGA TCTACTACAA CGTGCCGGGC TACGACCCGT CCGTGCTGCG CGACCAGCTC
GTCGCGCAAG GCAATGCGCT CGCGGCGGAT TTCACGAAGC TGATGCAGGC GGCCGGCGTG
AAGGGCGCGA CGGTGATGAG CGAGGCGTCG TCGATCAACG ACGTGTCGAC GCTGATCCTC
GATGGGGCGA AAGCGTTCGG CGCCGATCTC CTGGTGCTCG GCACGCACGG CCGCCGCGGG
TTCCGTCGCC TCGTGCTCGG CAGCATCGCC GAACAGTGCG TGCGGCACGC GACGCTGCCC
GTGTTGCTGA TCCCGGCCGC CGCGCATACC GACGCCGATC AGGATCTCTG A
 
Protein sequence
MYKRILVAID GSDTSRHAFD AALALAKEHG AELQPFYVVE NAAIYYNVPG YDPSVLRDQL 
VAQGNALAAD FTKLMQAAGV KGATVMSEAS SINDVSTLIL DGAKAFGADL LVLGTHGRRG
FRRLVLGSIA EQCVRHATLP VLLIPAAAHT DADQDL