Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5009 |
Symbol | |
ID | 4313900 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 2029696 |
End bp | 2030166 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638152852 |
Product | UspA domain-containing protein |
Protein accession | YP_776892 |
Protein GI | 115359754 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACAAGC GCATTCTGGT TGCCATCGAC GGCAGCGACA CGTCCCGCCA CGCGTTCGAT GCCGCGCTCG CGCTCGCGAA GGAGCACGGT GCCGAACTGC AACCGTTCTA CGTCGTCGAG AACGCCGCGA TCTACTACAA CGTGCCGGGC TACGACCCGT CCGTGCTGCG CGACCAGCTC GTCGCGCAAG GCAATGCGCT CGCGGCGGAT TTCACGAAGC TGATGCAGGC GGCCGGCGTG AAGGGCGCGA CGGTGATGAG CGAGGCGTCG TCGATCAACG ACGTGTCGAC GCTGATCCTC GATGGGGCGA AAGCGTTCGG CGCCGATCTC CTGGTGCTCG GCACGCACGG CCGCCGCGGG TTCCGTCGCC TCGTGCTCGG CAGCATCGCC GAACAGTGCG TGCGGCACGC GACGCTGCCC GTGTTGCTGA TCCCGGCCGC CGCGCATACC GACGCCGATC AGGATCTCTG A
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Protein sequence | MYKRILVAID GSDTSRHAFD AALALAKEHG AELQPFYVVE NAAIYYNVPG YDPSVLRDQL VAQGNALAAD FTKLMQAAGV KGATVMSEAS SINDVSTLIL DGAKAFGADL LVLGTHGRRG FRRLVLGSIA EQCVRHATLP VLLIPAAAHT DADQDL
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