Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4920 |
Symbol | araG |
ID | 4313811 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 1926338 |
End bp | 1927897 |
Gene Length | 1560 bp |
Protein Length | 519 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638152763 |
Product | L-arabinose transporter ATP-binding protein |
Protein accession | YP_776803 |
Protein GI | 115359665 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.671617 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGATGC AGACGATCAC GGCCGTGTCC GGCAACGACG ACGCGGCCAC GCACGGCGCC GCCGCGCCGC CCGGCGGCGC GCTGCTCTCG CTCGACGGGA TCACGGTGAC ATTCCCGGGC GTGCGCGCGC TCGATGCCGT GTCGCTGTCG GTGCGCGCGG GCGAAGTGCA CGGGCTGATG GGCGAGAACG GCGCGGGCAA GTCGACGCTG TTGAAGGTGC TGTCCGGCGT GAACCAGCCG CAGGCCGGCA CGCTGACGCT GAACGGCACG GTGCAGCGCT TCGCGTCGAC GCGCGCCGCG CTCGAGGCCG GCATCGCGAT CATCTACCAG GAGCTGCATC TGGTGCCGGA GCTGACGGTC GCGGAGAACC TGATGCTCGG GCAGTTGCCG AGCCGGCTCG GCGTGGTCGA CGAGCGCGCG CTCGCGGTGC GTGCGCTCGA TGCGCTGGAG CGCCTCGGCG AGCACATCGA TCCGGACATC CCGGTGAAGT ATCTGTCGAT CGGCCAGCGC CAGATGATCG AGATCGGCAA GGCGCTGATG CGCGACGCGC GCGTGATCGC GTTCGACGAA CCGACGAGTT CGCTGTCCGC GCGCGAGACG ACGCAGCTGT TCCGCATCAT CCGCTCGCTG CGCGCGGAAG GGCGAGCGAT CATCTACGTC ACGCACCGGA TGGAGGAAGT CGACGCGCTG TGCGACCGCG TGACGGTGTT CCGCGACGGC CGCCGGATCG AGACGTTCGA ATCGGTCGCC GAGCTCGATC GCGACCAGCT GATCGGCTGC ATGGTCGGCC GCTCGATCGA GGACGTGTAC GGCTACCGGC CGCGCGCGGC CGGCGACGTG ATGATCGAGG CGAAGGGGCT GACCGGGCCC GGCTTGTCCG AGCCGGTGTC GTTCGCCGCG CGCCGCGGCG AGATCGTCGG CTTCTTCGGG CTCGTCGGCG CGGGCCGCTC GGAGCTGATG AAGCTGCTGT ACGGCGCGAC GCGCCCGAGC GGCGGCCACG TCGAGCTGGG CGGCAAGCGC GTCGCGTTTT CGAGCCCGCG CCACGCGGTG CGCGCCGGCA TCGCGCTGTG CCCGGAGGAT CGCAAGCAGG AAGGCATCGT CGCGATCGCG TCGGTGGCCG ACAACCTGAA CATCAGCGCG CGCCGTCATT TCAGCCCGGC GCGCGTGCTG CTCGACGCGC GGCGCGAACG CGACCTCGCG CAACGCTACA TCGAGCGGCT CGCGATCAAG ACGCCCGACG GCGACACGCC GATCGGCGCG CTGTCGGGCG GCAACCAGCA GAAGGTCGTG CTCGCGCGCT GGCTGGCCGA GCGCATCGAC GTGTTCCTGA TGGACGAGCC GACGCGCGGC ATCGACGTCG GCGCGCGCGC GGAAATCTAC AACCTGTTCT ACGAACTCGC GGAAGCGGGC CGCACGGTGA TCCTCGTGTC GAGCGACCTG GCCGAGGTGA TCGGCGTGTC GGACCGGATC ATCGTGATGA AGGAAGGACG GATCGCGGGC GAAGTGGCGA AGGCGCAGGC GACGCCCGAC GCGCTGATCA AGCTCGCGCT GCCGCGTTAG
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Protein sequence | MTMQTITAVS GNDDAATHGA AAPPGGALLS LDGITVTFPG VRALDAVSLS VRAGEVHGLM GENGAGKSTL LKVLSGVNQP QAGTLTLNGT VQRFASTRAA LEAGIAIIYQ ELHLVPELTV AENLMLGQLP SRLGVVDERA LAVRALDALE RLGEHIDPDI PVKYLSIGQR QMIEIGKALM RDARVIAFDE PTSSLSARET TQLFRIIRSL RAEGRAIIYV THRMEEVDAL CDRVTVFRDG RRIETFESVA ELDRDQLIGC MVGRSIEDVY GYRPRAAGDV MIEAKGLTGP GLSEPVSFAA RRGEIVGFFG LVGAGRSELM KLLYGATRPS GGHVELGGKR VAFSSPRHAV RAGIALCPED RKQEGIVAIA SVADNLNISA RRHFSPARVL LDARRERDLA QRYIERLAIK TPDGDTPIGA LSGGNQQKVV LARWLAERID VFLMDEPTRG IDVGARAEIY NLFYELAEAG RTVILVSSDL AEVIGVSDRI IVMKEGRIAG EVAKAQATPD ALIKLALPR
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