| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4919 |
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| Symbol | araH |
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| ID | 4313810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 1925283 |
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| End bp | 1926302 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638152762 |
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| Product | L-arabinose transporter permease protein |
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| Protein accession | YP_776802 |
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| Protein GI | 115359664 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.259607 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGG CAATGCAACC CCAACGCACT TCCCCGTCCC CGGATGCCAC GGCCGCGCCC
GCGCGAGCGC GCGGCGGCGT GTGGCAACTG ATCAACCGCT CCGGCATCGT GATGGTGTTT
CTCGTGCTGT TCGCGACGCT GTCGCTGACC GTGCCGGACT TCCTCACGCC GCGCAACATC
CAGGGCCTTT TGCTGTCGGT CACGCTGATC GGTTCGATCG CGGTGACGAT GATGTTCGTG
CTCGCGCTCG GCGAAGTCGA CCTGTCGGTC GCGTCGATCG TCGCGTTCTC GGGCGTCGTC
GCGTCGACGC TGATCACCGC GACGCACAGC GTGGTGTTCG GTACCGTGGC CGGCATCCTC
GCGGGCGGCG CGGTCGGGCT CGTGAACGGC GTGCTGATCG CGCGCTGGCG GATCAATTCG
CTGATCGTCA CGCTCGCGAT GATGGAAGTC GTGCGCGGGC TCGCGTTCAT CACGTCGAAC
GGCGACGCGG TGATGATCTC CGAGGAACGC TTCTTCGAGC TCGGCGCCGG CTCGTTCCTC
GGCATCTCGT ATCCGATCTG GAGCAACATC GTTGGCTTCG TCGTGTTCGG CTTCCTGCTG
CGCAAGACGG TGTTCGGCAA GAACGTGCTG GCCGTCGGCG GCAACGGCGA GGCCGCGCTG
CTCGCGGGGC TGCCGGTGAT GCGCATCAAG ATCGCGGTGT TCGTGCTGCA GGGGCTCGTG
ACCGGCTTCG CCGGCGTGAT GCTCGCGTCG CGGATGAGCC TCGGCGACCC GAAGACGTCG
GTTGGCCTCG AGCTCGGCGT GATCTCCGCG TGCGTGCTCG GCGGCGTGTC GCTGACGGGC
GGTGTGGCGA CCATCTCCGG CGTGCTGGTC GGCGTGCTGA TCATGGGCTC CGTGCAGGAC
GCGATGAGCC TGTTGAACGT GCCGACCTTT TACCAATATC TGATACGCGG CGGAATTCTG
TTGCTCGCGG TGCTGTTCGA CCAGTATCGT CGCAACCAGC GGCGCGCGAT GAAGATCTGA
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| Protein sequence | MSQAMQPQRT SPSPDATAAP ARARGGVWQL INRSGIVMVF LVLFATLSLT VPDFLTPRNI
QGLLLSVTLI GSIAVTMMFV LALGEVDLSV ASIVAFSGVV ASTLITATHS VVFGTVAGIL
AGGAVGLVNG VLIARWRINS LIVTLAMMEV VRGLAFITSN GDAVMISEER FFELGAGSFL
GISYPIWSNI VGFVVFGFLL RKTVFGKNVL AVGGNGEAAL LAGLPVMRIK IAVFVLQGLV
TGFAGVMLAS RMSLGDPKTS VGLELGVISA CVLGGVSLTG GVATISGVLV GVLIMGSVQD
AMSLLNVPTF YQYLIRGGIL LLAVLFDQYR RNQRRAMKI
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