| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4877 |
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| Symbol | |
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| ID | 4313768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 1882048 |
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| End bp | 1883208 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638152720 |
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| Product | radical SAM domain-containing protein |
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| Protein accession | YP_776760 |
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| Protein GI | 115359622 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR03470] hopanoid biosynthesis associated radical SAM protein HpnH |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.481897 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCTATTC CGCTGCTCCA GCAAGTCCGC GTCGGCGCAT ACATCATGCG CCAACACCTG
TCCGGCAACA AACGCTATCC GCTCGCGCTG ATGCTCGAGC CGCTGTTCCG CTGCAACCTC
GCGTGCAACG GCTGCGGCAA GATCGACTAT CCGGACCCGA TCCTGAATCA GCGCCTGTCC
GTCGAGGAAT GCCTGGGCGC CGTCGACGAG TGCGGCGCGC CCATCGTGTC GATCGCCGGC
GGCGAGCCGC TGCTCCACAA GGAGATGCCG GAGATCGTCA AGGGCATCAT GAAGCGCAAG
AAATTCGTGT ACCTGTGCAC GAACGCGCTC CTGATGGAAA AGAAGATGGA CGACTACGAG
CCGAATCCGT ACTTCGTCTG GTCGGTCCAC CTCGACGGCG ACAAGGAGAT GCACGACCAT
TCCGTGTCGC AGGAAGGCGT GTACGACAAG GCGGTCGCGG CCATCAAGGA AGCGAAGCGC
CGCGGCTTCC GCGTGAACAT CAACTGCACG CTGTTCAACG ATGCGATCCC CGAGCGCGTC
GCGAAGTTCT TCGACACGCT CGAGCCGATC GGCGTCGACG GCATCACCGT GTCGCCGGGC
TACGCATATG AACGCGCGCC GGATCAGCAG CACTTCCTGA ACCGCGACAA GACGAAGAAC
CTGTTCCGCG AGATCCTGAA GCGCGGCGAA GGCGGCAAGC GCTGGTCGTT CAGCCAGTCG
TCGCTGTTCC TCGACTTCCT GGCCGGCAAC CAGACGTACA AGTGCACGCC GTGGGGCAAC
CCCGCACGCA CCGTGTTCGG CTGGCAGAAG CCGTGCTATC TGGTCGGCGA AGGTTACGTG
AAGACCTTCA AGGAACTGAT GGAAGACACG AACTGGGACA ACTACGGCGT CGGCAACTAC
GAGAAGTGCG CGGACTGCAT GGTCCACTGC GGCTTCGAAG CCACCGCCGT GATGGACACG
ATCTCGCATC CACTGAAGGC GCTGCGCGTG AGCAAGAAGG GCATCAAGAC CGACGGCCCG
TTCGCACCGG ACATCTCGAT CGCGAAGCAG CGTCCGGCCG AGTACGTGTT CTCGCGCCAC
GTCGAGATCA AGCTCGACGA AATCCAGCGC GCCGGCAAGG GCAAGCTGCA GAAGCCGGCG
AAGTCGGCAA CGGCCGCTTA A
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| Protein sequence | MSIPLLQQVR VGAYIMRQHL SGNKRYPLAL MLEPLFRCNL ACNGCGKIDY PDPILNQRLS
VEECLGAVDE CGAPIVSIAG GEPLLHKEMP EIVKGIMKRK KFVYLCTNAL LMEKKMDDYE
PNPYFVWSVH LDGDKEMHDH SVSQEGVYDK AVAAIKEAKR RGFRVNINCT LFNDAIPERV
AKFFDTLEPI GVDGITVSPG YAYERAPDQQ HFLNRDKTKN LFREILKRGE GGKRWSFSQS
SLFLDFLAGN QTYKCTPWGN PARTVFGWQK PCYLVGEGYV KTFKELMEDT NWDNYGVGNY
EKCADCMVHC GFEATAVMDT ISHPLKALRV SKKGIKTDGP FAPDISIAKQ RPAEYVFSRH
VEIKLDEIQR AGKGKLQKPA KSATAA
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