Gene Bamb_4786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4786 
Symbol 
ID4313677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1778997 
End bp1780004 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content50% 
IMG OID638152629 
Producthypothetical protein 
Protein accessionYP_776669 
Protein GI115359531 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.05274e-07 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.869518 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCATA AAATCTTTGA TTGGCTGGAC ATTGCCGGAG ACTTCTCAGA AACTTTGTTG 
GTCGGAAATG GAGCCAGCGT TGCAGTACAC GGCGAATTCG GATACAGGGG CCTATACGAA
GCGGCACAAG TGCATCGCTT TATCGACGCT GCGGTACAGG ACGTCTTCAC GAAGTTTGAA
ACGAACGATT TTGAACTCGT GCTTCGCCGG CTGTGGCAGA CGAAACAGGT AAATACCGCG
TTGGGCATTG CCGTGAAGGA GGTGGACGAC GCCTACTCGG CGGTACGTGG TGCCTTGATT
AAGACGGTCC AAAGGGTGCA CGTGTCCTAT GAAGACGCCA AGGCGTCCCT TTCGCCCATC
TACAAGTTCA TGCGGCAATT TCGAACTGTC ATATCGTTAA ACTACGATCT CATCGTCTAT
TGGGCGGCAC AGTTCGGAAA TGACGATCTG GGGAGCAGAT ATCATTTCAA GGACGGATTC
AACCGAAGCG TTTTCGCTGA CAACTGGGCG ATGTATAGAG AATCATATGG CGGCATCGAA
AATCCGACCA TTTTCTGCTA TCCGCATGGC AATATCGCGC TCGGCATGAC AATGTCTCTT
GACGAACAGA AGATATTGGC TGTTTCGCAG GATTTGTTGA ACTCAATCAT TGATGCCTGG
AATACCGGGA CTTGTGCGCC GATTTTTGTT TGTGACGGTA CGTCTAAGCA AAAAATCGAA
GCTATCTCGA AGTCGAACTA CCTCCGAAGC GTGTACGATG GTCCGTTAAG CGAAGTCGGT
GAGTCACTAG TGATTTATGG TTGGGGCATC GCGAAACAAG AGGAACATAT TCTAAAACGG
ATAGGAGAAG CCGCTCCGAA GCGGATCGCT GTTTCCGTGT ATGACGGCAT GCAGACCTAC
TGCGACCACG CACATAGAGT CCTTTCGGAT ATTGGTGTCA GGGACATACG GTTCTTTCAC
TCCAATAGCG ATGGAGCTTG GAACAATCCG GTTCCCTTGA CTCCCTAG
 
Protein sequence
MTHKIFDWLD IAGDFSETLL VGNGASVAVH GEFGYRGLYE AAQVHRFIDA AVQDVFTKFE 
TNDFELVLRR LWQTKQVNTA LGIAVKEVDD AYSAVRGALI KTVQRVHVSY EDAKASLSPI
YKFMRQFRTV ISLNYDLIVY WAAQFGNDDL GSRYHFKDGF NRSVFADNWA MYRESYGGIE
NPTIFCYPHG NIALGMTMSL DEQKILAVSQ DLLNSIIDAW NTGTCAPIFV CDGTSKQKIE
AISKSNYLRS VYDGPLSEVG ESLVIYGWGI AKQEEHILKR IGEAAPKRIA VSVYDGMQTY
CDHAHRVLSD IGVRDIRFFH SNSDGAWNNP VPLTP