Gene Bamb_4780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4780 
Symbol 
ID4313672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1772671 
End bp1773537 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content70% 
IMG OID638152624 
Productaminoglycoside/hydroxyurea antibiotic resistance kinase 
Protein accessionYP_776664 
Protein GI115359526 
COG category[V] Defense mechanisms 
COG ID[COG3570] Streptomycin 6-kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.35446 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.688015 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGATGG CCGGCGGCGG CACCGGTCGA ACCCCGCTGC GGATGAGCCG GTTCGCCTGT 
ACCATCGTCC GCATGTTCGA TACGTACCTG CGCCTGTGGG ACCTCGTTCC TGACGGCGGC
CCGATCCTGA CCGCGAGCGG CGGCGTGCTG CCCGTCGTCT GGCACGCGCG GCCCGCGATG
CTGAAAGTCG CCACGTGCGA CGAAGAGCGC CGCGGCAATG CCCTGATGAC CTGGTGGAAC
GGGGACGGTG CCGCACGCGT GTTGCTGCAC GACAGCGACG CGGTGCTGCT CGAGCGCGCG
CAGCCGGCGC CGACGCTCGC CGGCCTGTCC GCCGCGGGCC ACGACGACGA TGCGATCCGG
ATCGCGTGCG CTGCCGTCGC GCGGCTGCAT GCGCATCGCG CCCCGGCGCC GCCCGCGCTC
GTGCCGCTGC ACGACTGGTT CTACGCGCTG CTGTCGCACG ACACGGACGA CGACGTGCTG
CGCCGCTCAG CCGCGACGGC GCATCGGCTG CTGGCCGTGC AATCCACCGA CGAAGTCGTG
CTGCACGGCG ACATCCATCA CGGCAACGTG CTGCACTTCG GCGACCGCGG CTGGCTCGCG
ATCGACCCGA AGGGTTTGCG CGGCGATCGC GCGTTCGACT ACGCGAACCT GTTCTGCAAT
CCCACGCACG ATATTGCGGT CGATCCGGCG CGCTTCGCGC GGCGCGTCAT GCTCGTCGCT
GAAGTGACGC GGATCGACCG GCGCCGGCTG CTGCAATGGA TCCTCGCATG GGCCGGTTTG
TCGGCAGTCT GGATGATGGA AGATGCGCTG CCGGCGGATA CGCGGGTGGA GGTCGGGAGG
CTGGCGGCGG CTGTGCTCGA CCGATAG
 
Protein sequence
MRMAGGGTGR TPLRMSRFAC TIVRMFDTYL RLWDLVPDGG PILTASGGVL PVVWHARPAM 
LKVATCDEER RGNALMTWWN GDGAARVLLH DSDAVLLERA QPAPTLAGLS AAGHDDDAIR
IACAAVARLH AHRAPAPPAL VPLHDWFYAL LSHDTDDDVL RRSAATAHRL LAVQSTDEVV
LHGDIHHGNV LHFGDRGWLA IDPKGLRGDR AFDYANLFCN PTHDIAVDPA RFARRVMLVA
EVTRIDRRRL LQWILAWAGL SAVWMMEDAL PADTRVEVGR LAAAVLDR