Gene Bamb_4778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4778 
Symbol 
ID4313670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1769790 
End bp1770401 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content68% 
IMG OID638152622 
Producthypothetical protein 
Protein accessionYP_776662 
Protein GI115359524 
COG category[S] Function unknown 
COG ID[COG2860] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.908441 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.634618 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATACGC TTTATCTGAT TGCGATCGTC GCCGAAGCGA TGTCGGGCGC GCTGATGGGA 
ATGCGGCGCG GGATGGACCG CTTCGGGCTC GCGCTCGTCG GCGCGGTGAC GGCGCTCGGC
GGCGGCACCG TGCGCGACGT GCTGCTCGGC CACTATCCGC TCGGCTGGAT CGCGCGCCCC
GAGTACCTCG TGATCACGCT CGCCGCGGCG ACCGTCGCGT CGTGGGCCGC GCGGCACTTC
GCGCGCATGA AGGCGCTGTT CGTCACCGTC GATGCGATCG GCCTCGCGGC GTTCACGATC
ATCGGCTGCG ACGTCGGCGC ATCGACGGGC ACCGCGCCGA TCATCATCGT GCTGGCCGGC
GTGATCACCG GCGTGTGCGG CGGGATGCTG CGCGATTTGC TGTGCAACGA GATGCCGTTG
ATTTTGCGCG AGGAGCTGTA TGCGAGCGTC GCGTTCTTCA CGGGGACGCT GTATGTCGGG
ATGCAGTATC TCGGCATCGA TGCCGGGTTC GCGACGGTGG TCGCGCTGGC GGCCGGATTT
TCGATGCGGA TGCTTGCCGT GCGGCTCGGA TGGAAGATGC GGACGTTCGG CGCGGCGGAT
GTCGGGCATT GA
 
Protein sequence
MHTLYLIAIV AEAMSGALMG MRRGMDRFGL ALVGAVTALG GGTVRDVLLG HYPLGWIARP 
EYLVITLAAA TVASWAARHF ARMKALFVTV DAIGLAAFTI IGCDVGASTG TAPIIIVLAG
VITGVCGGML RDLLCNEMPL ILREELYASV AFFTGTLYVG MQYLGIDAGF ATVVALAAGF
SMRMLAVRLG WKMRTFGAAD VGH