| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4768 |
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| Symbol | |
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| ID | 4313660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 1760305 |
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| End bp | 1761459 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638152612 |
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| Product | porin |
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| Protein accession | YP_776652 |
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| Protein GI | 115359514 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAACAAGA AACTGTTGAC CATCGCCATC CTCGCAGCAA CGGCCGGCAC GGCACACGCG
CAAAGCAGCG TGACCCTGTA CGGCGTGATC GACGCCGGTA TCAGCTACGT GAACCACAGC
AAGACCGCGA ACGGCGGCAG CGGCAAGCTG TTCAAGTACG ACGACGGCGT GGCCCAGGGC
AGCCGTTGGG GCCTGCGCGG CACCGAAGAC CTCGGTGGCG GCCTGAAGGC GATCTTCGTG
CTCGAAAACG GCTTCAACAG CGGCAACGGC TCGATCGGCC AGGGTGGCGC GATCTTCGGC
CGCCAGGCTT ACGTTGGCCT GAGCCAGTCG CAATTCGGCA CGGTCACGCT CGGCCGTCAG
TACTCGTTCT CGACCGACAT CCTCGGTTCG AACTACTCGA CGGGCGGCAA CACGGTCGCG
GGCAACTACG CGTACCACGT GAACGACGTC GACCAGCTCA CGTCGAGCCG CATCAACAAC
TCGGTGAAGT TCCAGAGCGC GAACTACGCC GGCTTCACGT TCGGCGCGTT GTACGGCTTC
TCGAACTCGA CCGACTTCGC TGGCGCAGCG GGCACGGGCG CCACGAACAC GGGCGGCTCG
TCGCGTGCAT ACAGCTTCGG CGTGAACTAC GCGAACGGCC CGTTCGCACT CGGCGCGGCC
TACACGGACA TCCGCTTCCC GAGCCAGTCG TCGCCGGCAT TCTCGACGAC GATCGCGAAC
ATCAGCACGG GTAACATCCG CGACCTGCGC ACGTACGGCG TCGGCGGCCG CTACATCTTC
GGCCCGGCAA CGGCATGGGC CCTGTGGACG CGCACGCAGT TCACCCCGGT CGCAGCGGGC
GCATCGGGCA CGTTCTACAA CGCATATGAA GCTGGCCTGA AGTACGCATT CACGCCGGCC
CTGTCGGCAG CGGCGGGCTA CACGTACACG AACGCCACGC AAAACGGCGG CTCGGCACAC
TGGAACCAGG GCAACCTGGG CCTGGACTAC GCGCTCAGCA AGCGTACGGA CGTGTACGGC
CTGGTCGTCT ACCAGAAGGC GTCGGGCAAC AACGTGCAAG CGCAGATCGG CTCGAGCACG
AGCTACTTCA ACACGTCGGG CACGGGTTCG TCGAATCAGC TGGCCGCTCG CGTCGGTATC
CGTCACAAGT TCTAA
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| Protein sequence | MNKKLLTIAI LAATAGTAHA QSSVTLYGVI DAGISYVNHS KTANGGSGKL FKYDDGVAQG
SRWGLRGTED LGGGLKAIFV LENGFNSGNG SIGQGGAIFG RQAYVGLSQS QFGTVTLGRQ
YSFSTDILGS NYSTGGNTVA GNYAYHVNDV DQLTSSRINN SVKFQSANYA GFTFGALYGF
SNSTDFAGAA GTGATNTGGS SRAYSFGVNY ANGPFALGAA YTDIRFPSQS SPAFSTTIAN
ISTGNIRDLR TYGVGGRYIF GPATAWALWT RTQFTPVAAG ASGTFYNAYE AGLKYAFTPA
LSAAAGYTYT NATQNGGSAH WNQGNLGLDY ALSKRTDVYG LVVYQKASGN NVQAQIGSST
SYFNTSGTGS SNQLAARVGI RHKF
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