Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4764 |
Symbol | |
ID | 4313656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 1755717 |
End bp | 1756637 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638152608 |
Product | LysR family transcriptional regulator |
Protein accession | YP_776648 |
Protein GI | 115359510 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.6122 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGCA TCCGCAACCA CCTGAACACC GCGCAGCTCC ACGCGTTCGT CTCCGCCGCG CATCACAAGA GCCTGCGCGC CGCCGCGCGC GAGCTCGGCG TCACGCAGCC CGCGATCACG CATACGATCC GCGAACTCGA AACGGCGCTG AACGCGGAAC TGCTCGTGCG CAGCGTGCGC GGCGTCGAGC TGACCGCGTG CGGCCATGCG CTGCTGCCGC GCGCCGAGCA GCTGCTCGGC GACATGCGCC GCACGGTCGA GGCCGTCGAG CAGGTGAAAG GGGAAATGTC CGGGCGCGTC GCGGTCGGCA CGATGCCGTC GATCGCGCTG ACCGCGCTGC CGCACGCGGT CACCGCATTC CGCCGGTCGA TGCCGAACGT CAGCCTGCAT CTCGAGGAAG TGACGGTGCC CGACGCACTC GCGCAGCTGC GCAACGGCAC GCTCGACATC GCTGCAATGC ACCATGTGCC CGCGCTCGAC CGCGATTTCA CGCAGGTGCC GCTGCTGTCG ACCGAATTCA CCGTCGTGAT GCGCGAGGGC CACCCGCTCG CGCACGCGCG CCGGTTAGAG GAATTGCTCG ACGCCGAGTG GATCGTCACG GTCGGCGCCG AGCAGTTCCC GCACAGCGTA ATGAGCGCGA TGTTCGACGC GCGCGGGCTG CCGCTGCCCA AGCGCCTGCT GCGCTCGCCG ATGTCGTTCG CGGTGACGCT CGGGCTGGTC GCGCGCTCCG ACGTGATCGG CTGTTTCACG CGCCCGCTGG CCGCGATGGT GGCGCCGCTC GGCATCCGCA CGGCCGAGCT CGACGAAAGC ATGCCGCGCT TCGACCTGTC GATCATCGCG CGCCGCGACC TGCTGCCGAC GCCCGCCGTC TCGGAATTCG TCAGTTGCCT GCAGCGCGCG GTCAACGAAA CGCTCGGCTG A
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Protein sequence | MTRIRNHLNT AQLHAFVSAA HHKSLRAAAR ELGVTQPAIT HTIRELETAL NAELLVRSVR GVELTACGHA LLPRAEQLLG DMRRTVEAVE QVKGEMSGRV AVGTMPSIAL TALPHAVTAF RRSMPNVSLH LEEVTVPDAL AQLRNGTLDI AAMHHVPALD RDFTQVPLLS TEFTVVMREG HPLAHARRLE ELLDAEWIVT VGAEQFPHSV MSAMFDARGL PLPKRLLRSP MSFAVTLGLV ARSDVIGCFT RPLAAMVAPL GIRTAELDES MPRFDLSIIA RRDLLPTPAV SEFVSCLQRA VNETLG
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