Gene Bamb_4744 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4744 
Symbol 
ID4313636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1737019 
End bp1738002 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content71% 
IMG OID638152588 
Productalcohol dehydrogenase 
Protein accessionYP_776628 
Protein GI115359490 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID[TIGR02823] putative quinone oxidoreductase, YhdH/YhfP family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.5324 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCAGG GCATCGTGAT CGACAAGGAC GGCACCGGCC AGCACGCGCG GCTGCAAACG 
CTGGACGACG CGCAGTTGCC CGCGGGCAAC GTGACGATCC GGGTCGGCTA TTCGACGTTG
AACTACAAGG ACGGACTCGC GATCACCGGC AAGAGCCCGG TGGTCCGCAA GTTCCCGATG
GTGCCGGGCA TCGATCTGGT GGGCGAGGTC GAGCACAGCA CGCATCCGGA TTACCGCGCG
GGCGATCGGG TCGTGCTCAA CGGCTGGGGC GTCGGCGAAA CGCACTGGGG CGGCCTGGCC
CAGAAGGCAC GCGTCGACGG CGACTGGCTG GTGCCGCTGC CGGCCGCGTT TTCGCCGCAA
CAGGCGATGG CCATCGGCAC GGCGGGCTAC ACCGCGATGC TGTGCGTGAT GGCGCTGGAA
CGGCATGGCG TGCGCCCGGA CGACGGCGAG ATCGTGGTGA CCGGCGCGGC AGGCGGCGTC
GGCAGCGTCG CCATCGCCCT GCTCGCGCGG CTCGGCTATC GCGTCGTCGC CGTGACCGGC
CGCCCGGCCG ATGCCGACTA CCTGCGGCAG CTCGGCGCGG CGGAGATTCT CGACCGCTCG
CAATTCGGCG CCCCGGGCAA GCCGCTCGGC AAGGAACGCT GGGCCGGCGC GGTCGACGTC
GCGGGCAGTC ACGTGCTCGC CAACGTGTGC GCGACCACGC GCTATCGTGG CGTGGTGACG
GCCTGCGGCC TCGCCGCCGG CATGGACTTT CCCGCCACCG TCGCGCCGTT CATCCTGCGC
GGCGTGACGC TCGTCGGCAT CGACAGCGTG ATGTGCCCGC GCGCCGAGCG GCTGGAGGCA
TGGCGCCGGC TCGCGTCCGA TCTCGATGTC GGGAAGCTGG GCGCGATCGG TCATCAGGTC
GGCCTGGGCA ACGCCATACC GCTTGCCGAG GAACTGATCG CCGGCAAGAT ACGCGGCCGC
ATCGTCGTGG ACGTCAACGC ATGA
 
Protein sequence
MFQGIVIDKD GTGQHARLQT LDDAQLPAGN VTIRVGYSTL NYKDGLAITG KSPVVRKFPM 
VPGIDLVGEV EHSTHPDYRA GDRVVLNGWG VGETHWGGLA QKARVDGDWL VPLPAAFSPQ
QAMAIGTAGY TAMLCVMALE RHGVRPDDGE IVVTGAAGGV GSVAIALLAR LGYRVVAVTG
RPADADYLRQ LGAAEILDRS QFGAPGKPLG KERWAGAVDV AGSHVLANVC ATTRYRGVVT
ACGLAAGMDF PATVAPFILR GVTLVGIDSV MCPRAERLEA WRRLASDLDV GKLGAIGHQV
GLGNAIPLAE ELIAGKIRGR IVVDVNA