Gene Bamb_4680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4680 
Symbol 
ID4313572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1664391 
End bp1665848 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content67% 
IMG OID638152524 
Productd-galactonate transporter 
Protein accessionYP_776564 
Protein GI115359426 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID[TIGR00893] d-galactonate transporter 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGGCGT TGCTCATAAA CTCGCGGTCA TGTCATACGA CGACGTACCT TAACGTGCCC 
AACAATCAGA CCACCTCCCG CGATCTTCCG ATCGAACTCG CCGGCAGCGC GCGCCGGACC
GCTGTGCGCT ACTGGATCCT GGCGATGCTG TTCGTCGTCA CGACGCTCAA CTATGCGGAC
CGGGCGACGC TGTCGATCAC CGGCACGCCG ATCCGCAAGG CCTTCGGCAT CGATCCGGTG
ACGATGGGCT ACATCTTCTC GGCGTTCAGC TGGGCGTACG TGCTCGCGCA GTTGCCGAGC
GGCTGGCTGC TCGACCGCTT CGGCGCGCGC CGCGTGTATG CGGCGAGCAT TTTCCTGTGG
TCGGCGTTCA CGCTGCTGCA AAGCACGATC GGCCTCGGCG GCAGCGCCGC GTTCGCGGTG
ACCGCGCTGT TCGTGATGCG CTTCGCGGTC GGCATCGCCG AGGCGCCCGC GTTTCCCGCG
AACGCGAAGG TCGTCGCGAG CTGGTTCCCG ACCGCCGAGC GCGGCACGGC GTCGGCCATC
TTCAACGCCG CGCAGTATTT CGCGGCGGTG GTGTTCTCGC CGCTGATGGC GTGGCTCACG
CATGCGTACG GCTGGCACCA CGTGTACCTG TGGCTCGGCC TCGCCGGCAT CGCGCTCGCG
TTCCTGTGGC TGCGCGTGAT GAAGGACCCG GTCGACCATC CGGCGGTGAA CCGCGCGGAA
CTCGAGCATA TCGAGCAGGG CGGCGGCCTC GTGCGCTCGA CGGCCCGGCC GAGCGCGGCG
CACGGTAGCG GCGCGGCGTC CAAGGCATCC GAAGGCAGCC GCGTCGCCGG CTGGTACTAC
GTGCGCCAGC TGCTGTCGAA CCGGATGCTG CTCGGCGTCT ATCTCGGCCA GTACTGCGTG
AACGTGCTCA CGTACTTCTT CCTCACGTGG TTCCCGATCT ACCTCGTGCA GGCGCGCGGG
ATGTCGCTGC TGAAGGCCGG CTTCATGACG TCGCTGCCGG CGATCTGCGG GTTCCTCGGC
GGTGTGCTCG GCGGGATGCT GTCGGACCTG CTGATCCGTC GCGGCGTGTC GCTGACGCTC
GCACGCAAGA TTCCGATCGT CAGCGGGATG CTGCTGTCGA TGGTCATCAT CGGCTGCAAC
TACGTCGACA GCGAAGTGCT GGTGATCGTG CTGATGGCCG TGTCGTTCTT CGGCAAGGGA
ATCGGCTCGC TCGGCTGGGC CGTCGTCGCG GATACCGCGC CCAAGGAAGC GATCGGCCTG
TCGGGCAGCC TGTTCAACAT GTTCGGCAAC ACGGCCGGCA TCGTCGCGCC GATCGCGATC
GGCTACCTGG TCGGCGCGAG CGGCTCGTTC AACGGCGCGC TCGTGTTCGT CGGGCTGAAC
GCGCTCGTCA CGGTGTTCAG CTATCTGGTG ATCGTGAAGG ACATCAAGCG CGTCGAGCTG
CGTCATCGCG ACGCGTGA
 
Protein sequence
MAALLINSRS CHTTTYLNVP NNQTTSRDLP IELAGSARRT AVRYWILAML FVVTTLNYAD 
RATLSITGTP IRKAFGIDPV TMGYIFSAFS WAYVLAQLPS GWLLDRFGAR RVYAASIFLW
SAFTLLQSTI GLGGSAAFAV TALFVMRFAV GIAEAPAFPA NAKVVASWFP TAERGTASAI
FNAAQYFAAV VFSPLMAWLT HAYGWHHVYL WLGLAGIALA FLWLRVMKDP VDHPAVNRAE
LEHIEQGGGL VRSTARPSAA HGSGAASKAS EGSRVAGWYY VRQLLSNRML LGVYLGQYCV
NVLTYFFLTW FPIYLVQARG MSLLKAGFMT SLPAICGFLG GVLGGMLSDL LIRRGVSLTL
ARKIPIVSGM LLSMVIIGCN YVDSEVLVIV LMAVSFFGKG IGSLGWAVVA DTAPKEAIGL
SGSLFNMFGN TAGIVAPIAI GYLVGASGSF NGALVFVGLN ALVTVFSYLV IVKDIKRVEL
RHRDA