Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4661 |
Symbol | |
ID | 4313553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 1644026 |
End bp | 1645114 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638152505 |
Product | ABC transporter periplasmic-binding protein |
Protein accession | YP_776545 |
Protein GI | 115359407 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG4143] ABC-type thiamine transport system, periplasmic component |
TIGRFAM ID | [TIGR01254] ABC transporter periplasmic binding protein, thiB subfamily [TIGR03227] 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.762259 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.137959 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACTGC AGAATTCCTC GCGCGCCGCT GCCGGCGCGT TCCGCAAGCT CGCGCTGGCT GCCGGCGTCG CCGGCCTGAT GGGCGTCGCC TTGCCCGCGC ATGCGGCGAA CGCGGTCGTG CTGTATACGG CGGACGGCCT CGAGAACCTC TATCGCGATG TGCTGCCGGC CTTCGAGAAG AAGGAAGGCG TCAAGGTCAA CATCGTGACG GCGGGCAGCG GCGAGGTGGT CAACCGCGCG AACATCGAGA AGAACTCGCC GAAGGCGGAC GTGATCGTCA CGCTGCCGCC GTTCATTCAG CAAGCCGGCC AGATGGGCCT GCTGCAGCCG TACCAGAGCG TGAACTACAA GAACGTGCCG GCGATCGCGA AGGCGGAAGA CGGTACGTGG GCGACGTTCG TGAACAACTA CTTCTCGTTC GCGATCAACC CGGACGTCGT GAAGAACCAG CCGAAGACGT TCGCCGACCT GCTGTCGCCG AGCTATGCCG GCAAGGTGGC GTACTCGAAC CCGGCGACCG CCGGCGACGG AATGGCCGTG CTGATCCTGA CGACCTCGCT GATGGGCGAG GACAAGGCGT TCGACTACCT CGCGAAACTG TCGCAAAGCG TGAAGTTCCA CACCAAGGGC ACCGGCTACC TGAACGTGCT GCTGTCGCGC AACGAGATCA GCGTCGCGAA CGGCGACCTG CAGATGGACC TCGACGACGC CGAGCACGGC GCGCTGTCCG TCAAGCCGAT CTTCCTGGCC GCCAAGGACG GCGACCAGCC GACCACGTTC CAGCTGCCGT ACGGCATCGG TCTGATCAAG AGCGGCCCGA ACCAGGACGT CGGCAAGAAG CTGATCGACT ACCTGATGTC GACGGAAGTG CAGTCGAAGG TGCCGGACAT GTACGGCATC CCGGGCCGCA CCGACGTTCC GCTGGCCGGC AAGAACGGCG AAGCGGTGAA GAAGGCGATC GCGGGCGTGA AACTGATCCC GGTCGACTGG AGCCAGGTGA TGGCGAAGAA GCCGGTGTGG ATCGAGCGCT GGAAGAAGGA CGTGATCGGC AGCTCGGGCA AGCAGCTCGA CGTCGTCAAG CCGAAGTGA
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Protein sequence | MTLQNSSRAA AGAFRKLALA AGVAGLMGVA LPAHAANAVV LYTADGLENL YRDVLPAFEK KEGVKVNIVT AGSGEVVNRA NIEKNSPKAD VIVTLPPFIQ QAGQMGLLQP YQSVNYKNVP AIAKAEDGTW ATFVNNYFSF AINPDVVKNQ PKTFADLLSP SYAGKVAYSN PATAGDGMAV LILTTSLMGE DKAFDYLAKL SQSVKFHTKG TGYLNVLLSR NEISVANGDL QMDLDDAEHG ALSVKPIFLA AKDGDQPTTF QLPYGIGLIK SGPNQDVGKK LIDYLMSTEV QSKVPDMYGI PGRTDVPLAG KNGEAVKKAI AGVKLIPVDW SQVMAKKPVW IERWKKDVIG SSGKQLDVVK PK
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