| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4643 |
|---|
| Symbol | |
|---|
| ID | 4313535 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | - |
|---|
| Start bp | 1617391 |
|---|
| End bp | 1618302 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638152482 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_776527 |
|---|
| Protein GI | 115359389 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTGGGGA ATCTGTCGAC CCTCGATCTG CGGTTGATCC GCGTGTTTCT CGCGGTCACG
GACGCGGGCG GCGTGTCGGC CGCGCAGGCG ATGCTGAACG TCGGCCAGTC GACGATCAGT
GCGCAGCTGT CGTCGCTCGA GACGCGGCTC GGCTACCGGC TCTGCGAGCG CGGCCGCAGC
GGCTTCCGGC TCACGCCGAA GGGCGAGCGG TTCCATGCGA TGAGCCGCAA GCTGCTCGCG
GCGCTCGACG AATTCGGGAT GGCGGCGCGG CACATGGACC GCCAGCTGGT CGGCACGCTG
AACATCGGCC TGATCGGCCA TACGCCGATC AGCCAGAACG CGCGGATCGC CGAGGCGATC
GCCGCGTTCC GCACGCGCGA CCAGGCCGTG CGCTTCTCGA TCTCGGTGCG CGCGCCGGGC
GATCTCGAGG AGAAGCTGCT GAGCGACGAG ATCCAGATTG CCGTCGGCTA TTTCTGGCAT
CGCGTGCCGT CGCTGCATTA CACGCCGCTG TTCATCGAGC GGCAGATCGC GTATTGCGGG
CGCGGCCATC CGCTGTTCGA CGCGGCCGGC GCGCTGACGC CGGCCGATGT CGCGGAATTC
GAGTGGGCGT GGCGCTCGTA TCCGCTGCCG GAGGCGCAGA TGTCGACGAC GCCCGACCGC
GTGACCGCGA CCGCCGACAA CATGGAGGCC GTCGCGCTGC TGATCCTGTC GGGCCATCAC
CTCGGTTACC TGCCGCAGCA CTTCGCGGCG CCGTACGTCG CGCAGGGGCT GCTCGCGCCG
CTCAATCCGG AACAACTGCG CTACGACGTC ACGTTCCACA TGGTCGTCGC ACGCGACGGG
CGCGGCAATC CGCTCGTGGA GGCGTTTCTC GAGGATCTCG AGCACGCGCA CCAGGCGCCT
GACGCCGTGT GA
|
|---|
| Protein sequence | MLGNLSTLDL RLIRVFLAVT DAGGVSAAQA MLNVGQSTIS AQLSSLETRL GYRLCERGRS
GFRLTPKGER FHAMSRKLLA ALDEFGMAAR HMDRQLVGTL NIGLIGHTPI SQNARIAEAI
AAFRTRDQAV RFSISVRAPG DLEEKLLSDE IQIAVGYFWH RVPSLHYTPL FIERQIAYCG
RGHPLFDAAG ALTPADVAEF EWAWRSYPLP EAQMSTTPDR VTATADNMEA VALLILSGHH
LGYLPQHFAA PYVAQGLLAP LNPEQLRYDV TFHMVVARDG RGNPLVEAFL EDLEHAHQAP
DAV
|
|---|
| |