| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4633 |
|---|
| Symbol | |
|---|
| ID | 4313525 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | + |
|---|
| Start bp | 1606205 |
|---|
| End bp | 1606879 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638152472 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_776517 |
|---|
| Protein GI | 115359379 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.458937 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCTG CAAGCAAGGC CGTCACGTCC GAAAGCCGCG CGCTTGCGAC CGATGCGCGG
CGCAAATACG ATCCCGAGCA AACCAAGCGC AACATCCTGG ACGTCGCCAC GCAGGAGTTC
TCCGCGATGG GCCTCGCCGG TGCGCGCGTC GACGCGATCG CCGAGCGTAC GAACACGACG
AAGCGCATGC TCTACTACTA CTTCGAAAGC AAGGAAGGCC TGTACGAGGC CGTGCTGGAG
AAGGTGTACG GCGACATCCG CGCGCTCGAG CAGGAACTGC ACGTCGGCGA CATGGAGCCG
CGCGAAGGCA TGCGCCGGCT CGTCGAATTC ACGTTCGACT ATCACGACAA GCATCGCGAT
TTCGTGCGCC TCGTGTCGAT CGAGAACATC CACGGCGCGA AGTATCTCGA ACAGCTGAAG
TCGTTCAAGA ACCGCAACGT CAGCATCATC AAGACGCTCG AGGAACTGCT CGAGCGCGGC
GCCGCGAGCG GCGCGTTCCG CAAGGACATC GACGCGTTCG ACCTGCACCT GCTGATCAGC
TCGTTCTGCT TCCACCGCGT GTCGAACCGC TACACGTTCG GCGCCGCGTT CGGCCGCGAT
CCGTCGGCGC CGCGGTTGCG CGCGCGGCAT CGCGAGACTA TCGCCGACTC GGTGCTGCGC
TACGTCGCCG CGTAG
|
|---|
| Protein sequence | MKAASKAVTS ESRALATDAR RKYDPEQTKR NILDVATQEF SAMGLAGARV DAIAERTNTT
KRMLYYYFES KEGLYEAVLE KVYGDIRALE QELHVGDMEP REGMRRLVEF TFDYHDKHRD
FVRLVSIENI HGAKYLEQLK SFKNRNVSII KTLEELLERG AASGAFRKDI DAFDLHLLIS
SFCFHRVSNR YTFGAAFGRD PSAPRLRARH RETIADSVLR YVAA
|
|---|
| |