Gene Bamb_4605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4605 
Symbol 
ID4313497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand+ 
Start bp1570611 
End bp1571297 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content74% 
IMG OID638152444 
Productcytochrome c, class I 
Protein accessionYP_776489 
Protein GI115359351 
COG category[C] Energy production and conversion 
COG ID[COG2863] Cytochrome c553 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.0013993 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGATT CGGTCGACCT ACCGCGGCGC CGGTTCGCGC CGCTGCTGCT CGCCGCGGCC 
GCGCTGCTGG CCGGCCACGC CCGCGCGGAC GACATCGCGC TCGGCAAGAC GATCGCCACC 
CAGGGCACGA CGACGGGCGT GACCGCCTGC ATCGGCTGTC ACGGTGCACT GGGCGAAGGC 
AACGCGGCCG CCGGCTTCCC GCGTCTCGCC GGCACGAACG CCGGCTACCT GTCCGTGCAA 
CTCGCCGCGT TCGCGGACGG CAGCCGTCAG AACCCGGTCA TGCAGCCGCT CGCGAAACAG 
CTGTCGCCGC ACGAGCGCGA TGCGGTGTCC GCGTATTTCG CGAGCCTGCC CGCGCCGCCG 
GCCGTCACGG CGTCCAACGC CACGTCGATC GATCCGGCCA ACACCGGCGC ATGGCTCGCG 
ACGCGTGGAC GCTGGTCGCA GGGCCTGCCC GCCTGCGCGC AATGCCACGG CGCGGGCGGC 
CTCGGCGTGG GCGCCGCGTT TCCGCCGCTC GCCGGCCAGC CGGCCGCGTA TCTCGCGGGC 
CAGCTGCACG GCTGGAAGCA CGGCGCGCGC GCACCCGGCC CGATGGCGCT GATGCCGATG 
ATCGCCGGCA AGCTGTCCGA CGCCGACATC GACGCGGTGG CCGCCTACTA TGCGCGCGGC 
GGCGCCGCCA ACGGAGAAAA ACAATGA
 
Protein sequence
MNDSVDLPRR RFAPLLLAAA ALLAGHARAD DIALGKTIAT QGTTTGVTAC IGCHGALGEG 
NAAAGFPRLA GTNAGYLSVQ LAAFADGSRQ NPVMQPLAKQ LSPHERDAVS AYFASLPAPP 
AVTASNATSI DPANTGAWLA TRGRWSQGLP ACAQCHGAGG LGVGAAFPPL AGQPAAYLAG 
QLHGWKHGAR APGPMALMPM IAGKLSDADI DAVAAYYARG GAANGEKQ