| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4549 |
|---|
| Symbol | |
|---|
| ID | 4313441 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | + |
|---|
| Start bp | 1503416 |
|---|
| End bp | 1504120 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638152388 |
|---|
| Product | GntR domain-containing protein |
|---|
| Protein accession | YP_776433 |
|---|
| Protein GI | 115359295 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2186] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.858524 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGAGA AAATTCCCGC CCGTGCGATG AGCGATCACG TCGCGCAGCA GCTGCTCAAG
CAGATCGAAG CCGGCAGTTT CTCGGCCAGC GGCAAGTTGC CGACGGAAGC CGTGCTTGCG
CAGGAATTCG GCGTGAGCCG CACCGTGATC CGCGAGGCGA TCTCGCGGCT GAAGAACGAA
GGCGTGGTCG AGCCGCGCCA GGGCAGCGGC GTGTACGTGA ACCAGCACGG CGCGATCCGG
CCGCTGCGGA TCGACTACGC GGAAGCCGTC GAGGCCAGCT CGCTGCCGCA CCTGCTCGCG
GTGCGCCGCG CGATCGAGGC TGAAGTCGCG GCCGAAGCCG CGCTGCGCCA CACCGCCGAC
GACATGGCCG ACATCGACGA CGCGCTGCGC AAGATCGACG CTGCGGCGGC CGAAGGGCGC
GACGGCGTCG CGGAAGATGT CGCGTTCCAC CGCACGATCG CGGCCGTCAC CGGCAACCCG
TATTTCCTGA AGACGCTGCA GTTCCTGAAC CAGTACCTCG AGGCCGGCGT GAAGGTCACG
CGGCGCAACG AAGCGACGCG CGAGGATTTC TCGCGGCAGG TGCGCGAGGA ACACGCGGCG
ATCGCCGACG CGATCCGCGC GCGCGACCCG ATGGCGGCGC GCAACGCGGC ACGCACGCAC
ATGTACAACG CCGCGCGCCG TCTCGCGGAA GCCGGCATCT GCTGA
|
|---|
| Protein sequence | MFEKIPARAM SDHVAQQLLK QIEAGSFSAS GKLPTEAVLA QEFGVSRTVI REAISRLKNE
GVVEPRQGSG VYVNQHGAIR PLRIDYAEAV EASSLPHLLA VRRAIEAEVA AEAALRHTAD
DMADIDDALR KIDAAAAEGR DGVAEDVAFH RTIAAVTGNP YFLKTLQFLN QYLEAGVKVT
RRNEATREDF SRQVREEHAA IADAIRARDP MAARNAARTH MYNAARRLAE AGIC
|
|---|
| |