| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4544 |
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| Symbol | |
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| ID | 4313436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 1495884 |
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| End bp | 1498895 |
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| Gene Length | 3012 bp |
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| Protein Length | 1003 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638152383 |
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| Product | sarcosine oxidase alpha subunit family protein |
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| Protein accession | YP_776428 |
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| Protein GI | 115359290 |
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| COG category | [E] Amino acid transport and metabolism
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase)
[COG0492] Thioredoxin reductase |
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| TIGRFAM ID | [TIGR01372] sarcosine oxidase, alpha subunit family, heterotetrameric form |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGA AAGACCGCCT CGGCACCGGG GGCCGCATCA ATCGCGCGAT TCCGCTGACG
TTCACGTTCA ATGGCCGCAC GTATCAGGGC TTCCAGGGCG ACACGCTCGC GTCCGCGCTG
CTCGCGAACG GCGTGCACTT CGTCGCGCGC AGCTTCAAGT ACCACCGTCC GCGCGGGATC
GTGACGGCGG ACGTCGCGGA ACCGAATGCC GTCGTGCAGC TCGAGTCCGG CCCGTACACG
GTGCCGAACG CGCGTGCGAC CGAAATCGAG CTGTACCAGG GCCTCGTCGC GACGAGCGTG
AACGCCGAGC CGTCGCTCGA GAACGACAAG TACGCGATCA ACCAGAAGTT CTCGCGCTTC
ATGCCGGCCG GGTTCTACTA CAAGACCTTC ATGTGGCCGC GCAACATGTG GCCGAAGTAC
GAAGAGAAGA TCCGCGAGGC CGCTGGCCTC GGCAAGGCGC CCGAGGTGCT CGACGCCGAT
CGCTACGACA AATGCTACGC GCACTGCGAC GTGCTCGTGG TCGGCGGTGG CCCGTCGGGC
CTCGCCGCCG CGCATGCGGC CGCGACGGCC GGCGCGCGCG TGATCCTCGT CGACGACCAG
CGCGAGCTCG GCGGCAGCCT GCTGTCGTGC CGCGCGGAAA TCGACGGGAA GCCGGCGCAG
CAATGGGTCG AGAAGATCGA GGCCGAGCTG CGCAAGCTGC CTGACGTGAC GATCCTGTCG
CGCAGCACCG CATTCGGTTA TCAGGACCAC AACCTCGTGA CGATCACGCA GCGCCTGACC
GATCACCAGC CGGTGTCGAT GCGCAAGGGT ACCCGCGAGC TGCTGTGGAA GGTCCGCGCG
AAGCGCGTGA TCCTCGCGAC CGGCGCGCAC GAGCGTCCGA TTGTATTCGG CAACAACGAC
CTGCCGGGCG TGATGCTCGC TGGCGCGGTG TCCACCTACG TGCATCGCTA CGGCGTGATG
CCGGGCCGCA ACGTGGTCGT GTTCACGAAC AACGACCGTG CGTACCAGGC CGCGCTCGAT
CTGAAGGCGT GCGGTGCGAA GGTGACGGTC GTCGATTCGC GTGCGTCGTC GAACGGCGCG
CTGCCTGCCG CCGCGAAGCG GCAGGGCGTG ACGGTGATGA GCGGTGCCGT GGTGACGGCC
GCTTCGGGCA AGTGGCGCGT ATCGTCGGTC GACGTCGCGT CCTACACGAA CGGCCAGACC
GGCAGCAAGC TGCAGTCGCT GCCGTGCGAC CTCGTCGCGA TGTCGGGCGG CTTCAGCCCG
GTGCTGCACC TGTTCGCGCA GTCCGGCGGC AAGGCGTGCT GGAACGATGA GAAGGCGTGC
TTCCTGCCGG GCAAGCCCGT GCAGGCCGAG GCGAGCGTCG GTGCGGCCGC GGGCGAGTTC
GGTCTCGCAC GTGCGCTGCG GCTCGCACTC GACGCGGGCG TCGAAGCGGC GAAGGCGGCC
GGCTTCGCGG CGCCGCAGCG CGTGGCCGCG CCGCAGGTCG CCGAAACCGT CGAAGGCGCG
CTGCAGCCGT TGTGGCTCGT CGGCAGCCGC GAGGCCGCCG CACGCGGGCC GAAGCAGTTC
GTCGACTTCC AGAACGACGT GGCGGCCGCC GACATCCTGC TGGCCGCACG CGAAGGCTTC
GAGTCGGTCG AGCACGTGAA GCGCTACACC GCGATGGGCT TCGGCACCGA CCAGGGCAAG
CTCGGCAACA TCAACGGGAT GGCGATCCTC GCGCAAGCGC TCGGCAAGAC GATTCCCGAA
ACGGGCACGA CGACGTTCCG CCCGAACTAC ACGCCGGTGT CGTTCGGTAC GTTCGCGGGC
CGCGAGACCG GCGATTTCCT CGACCCGATC CGCAAGACGG CCGTGCATGA ATGGCACGTC
GAGCACGGCG CGCTGTTCGA GGACGTCGGC AACTGGAAGC GGCCGTGGTA TTTCCCGAAG
AACGGCGAGG ACCTGCATGC GGCCGTGAAG CGCGAATGCC TCGCGGTGCG CAACGGTGTC
GGCATCCTCG ACGCGTCGAC GCTCGGCAAG ATCGACATCC AGGGTCCGGA CGCGGTGAAG
CTGCTGAACT GGATGTACAC GAACCCGTGG AACAAGCTCG AGATCGGCAA GTGCCGCTAC
GGGCTGATGC TCGACGAAAA CGGGATGGTG TTCGACGACG GCGTGACGGT GCGCCTCGCC
GACCAGCATT TCATGATGAC GACGACCACC GGCGGCGCGG CGCGCGTGCT CACGTGGCTC
GAGCGCTGGC TGCAGACCGA ATGGCCCGAC ATGAAGGTGC GGCTCGCGTC CGTCACCGAT
CACTGGGCGA CGTTCGCGGT GGTCGGCCCG AAGAGCCGCA AGGTCGTGCA GAAGGTGTGC
CAGGACATCG ATTTCGGCAA CGACGCGTTC CCGTTCATGA GCTACCGGAA CGGCACCGTC
GCGGGCGCGA AGGCGCGCGT GATGCGGATC AGCTTCTCCG GCGAGCTCGC GTATGAAGTG
AACGTGCCGG CCAATGCAGG CCGCGCGGTG TGGGAAGCGC TGATGGCGGC CGGTGCCGAG
TTCGACATCA CGCCGTACGG CACCGAGACG ATGCACGTGC TGCGCGCGGA GAAGGGCTAC
ATCATCGTCG GCCAGGACAC CGACGGCTCG GTTACGCCGT ACGACCTCGG GATGGGCGGG
CTCGTCGCGA AGTCGAAGGA CTGCCTCGGC AAGCGCTCGC TGTCGCGCTC GGATACGTCG
AAGGAAGGCC GCAAGCAGTT CGTCGGCCTG CTGACCGAAG ACGAACAGTT CGTGCTGCCT
GAAGGCGCGC AGATCATCGC GAAGGACACG CAGGTGTCGA CGGTCGATCC GACGCCGATG
ATCGGCCACG TGACGTCGAG TTATTACAGC CCGATCCTGA AGCGCTCGAT TGCGCTGGCG
GTGGTGAAGG GCGGCCTGAA CAAGATGGGC GAGAGCGTCG TGATTCCGCT GGCCAACGGC
AAGCGCGTCA CCGCGAAGAT CTCGAGCCCG GTTTTCTACG ATACCGAAGG GGTGCGCCAG
CATGTGGAAT GA
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| Protein sequence | MSQKDRLGTG GRINRAIPLT FTFNGRTYQG FQGDTLASAL LANGVHFVAR SFKYHRPRGI
VTADVAEPNA VVQLESGPYT VPNARATEIE LYQGLVATSV NAEPSLENDK YAINQKFSRF
MPAGFYYKTF MWPRNMWPKY EEKIREAAGL GKAPEVLDAD RYDKCYAHCD VLVVGGGPSG
LAAAHAAATA GARVILVDDQ RELGGSLLSC RAEIDGKPAQ QWVEKIEAEL RKLPDVTILS
RSTAFGYQDH NLVTITQRLT DHQPVSMRKG TRELLWKVRA KRVILATGAH ERPIVFGNND
LPGVMLAGAV STYVHRYGVM PGRNVVVFTN NDRAYQAALD LKACGAKVTV VDSRASSNGA
LPAAAKRQGV TVMSGAVVTA ASGKWRVSSV DVASYTNGQT GSKLQSLPCD LVAMSGGFSP
VLHLFAQSGG KACWNDEKAC FLPGKPVQAE ASVGAAAGEF GLARALRLAL DAGVEAAKAA
GFAAPQRVAA PQVAETVEGA LQPLWLVGSR EAAARGPKQF VDFQNDVAAA DILLAAREGF
ESVEHVKRYT AMGFGTDQGK LGNINGMAIL AQALGKTIPE TGTTTFRPNY TPVSFGTFAG
RETGDFLDPI RKTAVHEWHV EHGALFEDVG NWKRPWYFPK NGEDLHAAVK RECLAVRNGV
GILDASTLGK IDIQGPDAVK LLNWMYTNPW NKLEIGKCRY GLMLDENGMV FDDGVTVRLA
DQHFMMTTTT GGAARVLTWL ERWLQTEWPD MKVRLASVTD HWATFAVVGP KSRKVVQKVC
QDIDFGNDAF PFMSYRNGTV AGAKARVMRI SFSGELAYEV NVPANAGRAV WEALMAAGAE
FDITPYGTET MHVLRAEKGY IIVGQDTDGS VTPYDLGMGG LVAKSKDCLG KRSLSRSDTS
KEGRKQFVGL LTEDEQFVLP EGAQIIAKDT QVSTVDPTPM IGHVTSSYYS PILKRSIALA
VVKGGLNKMG ESVVIPLANG KRVTAKISSP VFYDTEGVRQ HVE
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