| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4524 |
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| Symbol | |
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| ID | 4313416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 1476304 |
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| End bp | 1478073 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638152363 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_776408 |
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| Protein GI | 115359270 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATGCCG AATTATTCGC GCAGCATCAT GATTGCCCGG GCTGGGAAGG CGAAATGGCC
CGGCGCGTCG CTGCCTTCGA CTGGTCGTCC ACCGGCCTCG GCCCGCTCGA CGGCTGGTCG
GCGAGCCTCG TCGCTGCCGT GCGCACCGTG CTCGCGTCGC CGCTGCCGCT GGTGATGCTG
TGGGGCCGGC CCGGCTACAT GATCTACAAC GACGCGTATG CCGGGTTCGC CGGCGGGCGC
CACCCCTATC TGCTCGGCCA GCCGGTCGAG CTCGGCTGGC CCGAGGTCGC CGAGTTCAAC
CGGAACGTGA TGAACACCTG CCTCGCCGGC GGCACGCTGT CGTATCGCGA CAAGGAGCTC
GTGCTGCTGC GCAGCGGGCG CCCCGAAGAC GTATGGATGG ATCTGCACTA CAGCCCGCTG
CCCGACGACG ATGGCGCACC GGGCGGGGTG CTCGCCGTCG TGATCGAGAC GACCGAACGC
GTGCTCGCCA CGCGTCATCG CGAACAGGCG GAAGCGGCGC TGCAGTCGTC CAACGATGCG
CTGCGCCGCC TGACCGAAAC GCTCGAGCAA CGCGTGGCCG ATGCGATCGC CGAGCGCGCG
GCGGTCGAGG AGCAGTTGCG CCACTCGCAG AAGATGGAAG CGATCGGCAG CCTGACCGGC
GGCATCGCGC ACGACTTCAA CAACGTGCTG CAGGTGATCA GCGGCAACCT GCAGATTCTG
GCCGTCGAGC TCGGCGAGCG CGCGAGCGCG CAGCCGCGAA TCGAAAGCGC GAACAACGCG
GTGCGGCGCG GCGCGCAACT GGCGTCGCAC CTGCTGGCCT TCGCGCGCCG CCAGCCGTTG
TCGGCGACGG TGCTCAATCC GCATCAGTTG ATCCACGGGA TGAGCGAGAT GCTGCACCGC
GCGCTCGGCG AAACCGTGCG GATCGTCACC GCGCTGGCGC CCGACGTCGG CAACGTGCTC
GCCGACCGGC ACCAGCTCGA GAACGCGCTG CTCAATCTTG CGATCAATGC GCGCGACGCG
ATGAGCGGCG ACGGCACGCT GACGATCGCC GCGTACAACG ACGCGCATCC CACGCAGGCC
GGCGGCGCAC GGCGCTCGCC ATTGCCGGCC GGCGAATACG TGACGTTCGA GATCAGCGAT
ACGGGGGCCG GCATGACGGC CGACGTGCTC GAGCGCGTGT TCGAACCGTT CTTCACGACC
AAGCCGGACG GCGAAGGCAC CGGGCTCGGG CTGAGCATGG TGTTCGGTTT CGTCAAGCAA
AGCGGCGGCC ATACGTCGAT CGAAAGCACG CCGGGCCAGG GCACGACCGT GCGGCTCACA
TTTCCGCGCT GTCACGACGA CTGCGCGGAA GAGCCTGCCC GCGTGCCGCA GCACGATGCC
GCGCGCGGCC GCGAAACCAT CCTGGTCGTC GAGGACGACG CGGAGGTCCG GCTGACCGTG
GTCGACATGC TTACGCAGCT CGGCTACAAG GTGCTGACCG CGTCCGACGG CGAAGCCGCG
CTGCAGATAC TCGACTGCGA CGCGCATATC GACCTGCTGT TTACCGACGT GATCATGCCG
GGCCGCATCA AGGGCGGCGA ACTCGCGCGC CGCGCCGCGC AGCGCACGCC GCCGTTGCCG
GTGCTGTTCA CGTCCGGCTA CACGCGCGAC GAGATTTTCC ACTCCGGGCG GCTCGACCCC
GGCGTCATGC TGCTCGGCAA GCCGTACCGC CGCGACGAAC TCGCGGCCCG GATCCGCGAC
ATGCTCGACG CGCATCCAAA GGCGGCGTGA
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| Protein sequence | MHAELFAQHH DCPGWEGEMA RRVAAFDWSS TGLGPLDGWS ASLVAAVRTV LASPLPLVML
WGRPGYMIYN DAYAGFAGGR HPYLLGQPVE LGWPEVAEFN RNVMNTCLAG GTLSYRDKEL
VLLRSGRPED VWMDLHYSPL PDDDGAPGGV LAVVIETTER VLATRHREQA EAALQSSNDA
LRRLTETLEQ RVADAIAERA AVEEQLRHSQ KMEAIGSLTG GIAHDFNNVL QVISGNLQIL
AVELGERASA QPRIESANNA VRRGAQLASH LLAFARRQPL SATVLNPHQL IHGMSEMLHR
ALGETVRIVT ALAPDVGNVL ADRHQLENAL LNLAINARDA MSGDGTLTIA AYNDAHPTQA
GGARRSPLPA GEYVTFEISD TGAGMTADVL ERVFEPFFTT KPDGEGTGLG LSMVFGFVKQ
SGGHTSIEST PGQGTTVRLT FPRCHDDCAE EPARVPQHDA ARGRETILVV EDDAEVRLTV
VDMLTQLGYK VLTASDGEAA LQILDCDAHI DLLFTDVIMP GRIKGGELAR RAAQRTPPLP
VLFTSGYTRD EIFHSGRLDP GVMLLGKPYR RDELAARIRD MLDAHPKAA
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