Gene Bamb_4515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4515 
Symbol 
ID4313407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1468593 
End bp1469417 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content65% 
IMG OID638152354 
ProductOmpW family protein 
Protein accessionYP_776399 
Protein GI115359261 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3047] Outer membrane protein W 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.144856 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.41171 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGC TGATTGTCGC GGGTGTCGTC GCAGGCGTGT CGACGCTCGC ATCGGCCCAG 
CAGGCGGGCG ACAACGTCGC GACGCTGGGC TGGCTGCACA TCATGCCGCA GGATTCGACC
AACGGGCTGA CGACGAATCT CGCGAACATG CCGATCAACG GGCCGCTGCG GCTGCCCGGT
TCATTCACGT CGCCGGGCAC GAGCCTGACG GTCAACAACG CCGATACGGT CGGCCTCACG
CTCACGCACT TCTTCACCGA CCACATCGCG GTGACGTCGG TGCTCGGCGT GCCGCCCGAG
TTCACGCTGA CCGGACACGG CGTGATCCGG CCGCCCGGCC CGGCCGGCTC GCTCGGCAGC
GTCGACATGG ACAAGACGTC GAACCAGCCG GCCGTGAAGA ATGCGCGGCA GTGGAGCCCG
ACGATCATTC TGCAGTACTA CTTCAATGCA CCGACCGCGA AGTTCCGTCC GTTCGTCGGG
ATCGGTGTGG CCTACAGCTG GTTCAGCAAC ATCGAACTGA ACGGCAACTT CGCGAAGGAC
ATCAACGAGA ACCTCGGCAG CGTGCTCGCG GCCGGCGCCG GCAAGCCGGG GCCGACGTCG
GTGGAGGGCA AGGCGTCATC GTCGTTCACG CCGGTCTACA ACGTCGGCGC GAGCTATGCG
ATCGACAAGC ACTGGGGGCT CACGGCGACG CTGACCTACA TGCCGCTGAA GACCTACTCG
TCGCTCGTGA TCAAGGCGGC CGACGGATCG ACGCTCGCGA CCACGCGCAC GCGGCTGAAG
GCCGATCCGC TGATCACGTT CGTCGGCATT TCCTACAAGT TCTGA
 
Protein sequence
MKKLIVAGVV AGVSTLASAQ QAGDNVATLG WLHIMPQDST NGLTTNLANM PINGPLRLPG 
SFTSPGTSLT VNNADTVGLT LTHFFTDHIA VTSVLGVPPE FTLTGHGVIR PPGPAGSLGS
VDMDKTSNQP AVKNARQWSP TIILQYYFNA PTAKFRPFVG IGVAYSWFSN IELNGNFAKD
INENLGSVLA AGAGKPGPTS VEGKASSSFT PVYNVGASYA IDKHWGLTAT LTYMPLKTYS
SLVIKAADGS TLATTRTRLK ADPLITFVGI SYKF