Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4503 |
Symbol | |
ID | 4313395 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 1453617 |
End bp | 1454807 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 638152342 |
Product | secretion protein HlyD family protein |
Protein accession | YP_776387 |
Protein GI | 115359249 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | [TIGR00998] efflux pump membrane protein (multidrug resistance protein A) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCACCACG ACAACCTTCA TACCGCCGCG CAGCCGGCCG CACTGAACGA CCCGGCACTC GACGCGCGCC GGGCGACCCG CCGCAAGCGC TTCACGCTGT TCTTCGCGGT CGTGCTGCTG GCCGCGCTCG TGTGGATCGC GTTCTGGCTG CTGCACGACC GCTATGTCGA GGACACCGAC GACGCATACG TTGCGGGCAG CATCGTGCAG GTCGCCGCGC AGATCCCGGG CGCGGTGACC GACGTGCTGG TCGCCGATAC GCAGCCCGTG CGCGCCGGGC AGCCGCTCGT GCGGCTCGAC GACACCGAAG CGTCCGTCGC CTTCGCGCAG GCGAAGGCGC AGCTCGTGCA GGCCGTGCGG CAGGTCGCGA ACGCGAAGAT CTCGAACACG ATGTACGTGG AAGCCGTGAA CGCGCGCCAG GCCGACCTGT CGCTCGCGCA GCGCGCGCTC GCCGCGCGTT CGGGCGCATC GGTCGAGATC GTCGCGCCGG AGGAACTGGC GCGCGCCCAC GCGGCGGTCG CCGGCGCCCA GGCAAACCTC GCGGCCGCGC AGGCGCAGCT CGAAGCGGCG CGGGCGCTCG GCAGCAAGCT GCCGGTCGAC GAAAGCCCGG CCGTCGTGCA GGCGGCCGCG CAGTTCCGGC TCGCGTACCG GAACCTGAAG CGCACGACGA TCGTCGCGCC GGTCGACGGC ACGGTCGGCC AGCGTTCGGT GCAGGTTGGC CAGCAGGTCG GGCCCGGCGT GCCGCTGATG TCGATCGTGC AGCTGAACCG GCTGTGGATC GAAGCGAACT TCAAGGAAGG GCAGATTCGC CACATGCGCA TCGGCCAGCC GGTCGACGTG GTGTCGGACC TGTACGGCTC GCGGGTCGTC TATCGCGGCC GCGTGCAGGG CTTCTCGGCG GGCACCGGCA GCGCGTTCTC GATGCTGCCG TCGCAGAACG CGGCCGGCAA CTGGATCAAG GTCGTGCAGC GGGTGCCGGT CGTGATCGCG ATCGATCCCC GCGACCTGGC CGCGCATCCG CTCAGGGTCG GGTTGTCGAT GCGCGCGACC GTCGATACGC GCAACCGCGA CGGCCACGCG CTCGACAGCG AGCCGCCGAC GCCGGCCGTC AGCACGCGCG TGCACGACGG CGTCGCGAGC GACGCGCAAG CGGCTGCCAC CGCGATCATC CGCGAGAACC AGGGCGGATA A
|
Protein sequence | MHHDNLHTAA QPAALNDPAL DARRATRRKR FTLFFAVVLL AALVWIAFWL LHDRYVEDTD DAYVAGSIVQ VAAQIPGAVT DVLVADTQPV RAGQPLVRLD DTEASVAFAQ AKAQLVQAVR QVANAKISNT MYVEAVNARQ ADLSLAQRAL AARSGASVEI VAPEELARAH AAVAGAQANL AAAQAQLEAA RALGSKLPVD ESPAVVQAAA QFRLAYRNLK RTTIVAPVDG TVGQRSVQVG QQVGPGVPLM SIVQLNRLWI EANFKEGQIR HMRIGQPVDV VSDLYGSRVV YRGRVQGFSA GTGSAFSMLP SQNAAGNWIK VVQRVPVVIA IDPRDLAAHP LRVGLSMRAT VDTRNRDGHA LDSEPPTPAV STRVHDGVAS DAQAAATAII RENQGG
|
| |