| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4490 |
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| Symbol | |
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| ID | 4313382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 1436306 |
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| End bp | 1437547 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638152329 |
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| Product | Rieske (2Fe-2S) domain-containing protein |
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| Protein accession | YP_776374 |
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| Protein GI | 115359236 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.400487 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTAT CGGCAGACAT TCGTGCACTG ATCGCGCGAC GCAAGGAAGG CCACAGCCTC
GAGGCGCCGT TCTATACGAG CGAGGAAATC TTCGCCCTCG ACATGGAGGC GATTTTCCGC
CAGCACTGGA TCCAGGTAGC GGTCGAACCG GACATCCCCG AGCCGGGCGA CTACGTGACC
GTGGAACTGG GCAGCGACTC GATCCTGATC GTGCGCGACG ACGACATGGA AATTCGCGCG
TTCCACAACG TGTGCCGTCA TCGCGGCGCG CGCCTGTGCA ACGAGGACAA AGGCTCGGTC
GGCAACATCG TGTGCCCGTA CCACAGCTGG ACCTACAACC TGACCGGCCA GCTGATGTTC
GCCGAGCACA TGGGCGAGAA GTTCGACCGC TGCAAGCACA GCCTGAAGTC GGTGCACGTG
CAGAACCTCG CGGGGCTGAT CTTCGTCTGC CTCGCCGAGG AGCCGCCGGT CGATTTCGCG
CAGTTGCGCG CCGAGATGGA GCCGTACCTG CTGCCGCACG ATCTGCCGAA CACGAAGATC
GCCGCTCAGG TCGACATCAT CGAGGAAGGC AACTGGAAGC TCACGATGGA AAACAACCGC
GAATGCTATC ACTGCGTCGC GAACCATCCG GAGCTGACGA TCTCGCTGTA CGAATACGGC
TTCGGCTACC AGCGCTCCGA CGCGAACGCC GAAGGCATGG ACGCATTCGC CGAAACCTGC
GTGCGCCGCG GCAAGGAGTG GGCCGAGATG GGCCTGCCGT CCGCCGAAAT CGAAAAGCTG
AGCGACGTGA CGGGCTTCCG CACGCAGCGC CTGCCGCTCG ACCGCCACGG CGAATCGCAG
ACGCTCGACG CGAAGGTCGC GTCGAAGAAG CTGCTCGGCA AGTTCGACCA GGCCGACCTC
GGCGGCCTGT CGTTCTGGAC GCAGCCGAAC TCGTGGCACC ACTTCATGAG CGATCACATC
GTGACGTTCT CGGTGATTCC GCTGTCGGCC GGCAAGACGC TCGTGCGCAC CAAGTGGCTC
GTGCACAAGG ACGCGAAGGA AGGCATCGAC TACGACGTGA AGAACCTGAC GGCCGTGTGG
AACGCGACCA ACGATCAGGA TCGCGCGCTC GTCGAATTCT CGCAGCGTGG CGCGACCAGC
AGCGCGTACG AGCCGGGCCC GTATTCGCCG TTCACGGAAG GTCTCGTCGA AAAATTCTCG
GCCTGGTACA TCGGCCGGCT CGCCGAAAAA ACCGGCGCGT AG
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| Protein sequence | MKVSADIRAL IARRKEGHSL EAPFYTSEEI FALDMEAIFR QHWIQVAVEP DIPEPGDYVT
VELGSDSILI VRDDDMEIRA FHNVCRHRGA RLCNEDKGSV GNIVCPYHSW TYNLTGQLMF
AEHMGEKFDR CKHSLKSVHV QNLAGLIFVC LAEEPPVDFA QLRAEMEPYL LPHDLPNTKI
AAQVDIIEEG NWKLTMENNR ECYHCVANHP ELTISLYEYG FGYQRSDANA EGMDAFAETC
VRRGKEWAEM GLPSAEIEKL SDVTGFRTQR LPLDRHGESQ TLDAKVASKK LLGKFDQADL
GGLSFWTQPN SWHHFMSDHI VTFSVIPLSA GKTLVRTKWL VHKDAKEGID YDVKNLTAVW
NATNDQDRAL VEFSQRGATS SAYEPGPYSP FTEGLVEKFS AWYIGRLAEK TGA
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