Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4485 |
Symbol | |
ID | 4313377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 1430045 |
End bp | 1430971 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 638152324 |
Product | LysR family transcriptional regulator |
Protein accession | YP_776369 |
Protein GI | 115359231 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | [TIGR03418] putative choline sulfate-utilization transcription factor |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGCCAT TAGAGAGACT TATGTCGAAA TCCGAAGCGT TACCGTCGAT GCAGGCGCTG CGCGCGTTCG AATCGGCCGC CCGTCTCCAG AGCTTCACGG CCGCCGCGCG CGAGCTCGGC TCGACGCAGC CGGCCGTGAG CCAGCAGGTG TTCCAGCTCG AGGCGGAGCT CGGCGTGCCG CTGTTCGAGC GCAGCCCGCG CGGCGTCACG CTGACGAGCG ACGGCCAGTG CCTGTACGAA GCCGTACGGG TAAGTCTCGA CACGCTGCGC GGCGCCACCG CGACGCTGCG CGCGCGACGC GAGCACGGCG CGCTCACGAT CGTCACGGAT TTCGGCTTCG CGACCTACTG GCTGATGCCG CGCCTCGCAG GCCTGAAGCA CGTGATGCCG GACGTCGACG TGCGGGTCGT CACGTCACAG GATTACGACG CGCAGCGCGA CCACGCCGAC ATCGCGATCC TGTTCGGCGA CGGCCACTGG CCGTCGTGCA CGGCCGCCCG GCTCTTTCCC GAATCCGTCA CGCCCGTCTG CTCGCCCGCG TTCCGCGCCG CGCACCCGGA CGTCGCTCGG CCCGACCACC TGCACGCGCT GCCGCTGCTG CACGTGCAGC CGACGCGCCC CGAGCGCTGG CTGTCGTGGG CCGGCTGGTT CGACGCGCAC GGCCTCGACG CGCCGGCCGC CGCGCGCGGC GTGACCTTCA ACAGCTACGC GCTGGTGATC CATGCGGCGC TCCTCGGCGA GGGCGTCGCG CTCGGCTGGT CGCCGCTCGT CGACGAGCTC GTCGCGTCCG GGCAGCTCGT GAAGCTCGTC GACGCGCCCG TCGTGACGTC GCGCGGCTAC TTCCTCGTGC GGCCGCCGCA GCGGCCCGAG ACGGACGCGA CCCACGTGTT CCGGCGCTGG CTGCTCGACG CATGCGCGTG CGCGTGA
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Protein sequence | MGPLERLMSK SEALPSMQAL RAFESAARLQ SFTAAARELG STQPAVSQQV FQLEAELGVP LFERSPRGVT LTSDGQCLYE AVRVSLDTLR GATATLRARR EHGALTIVTD FGFATYWLMP RLAGLKHVMP DVDVRVVTSQ DYDAQRDHAD IAILFGDGHW PSCTAARLFP ESVTPVCSPA FRAAHPDVAR PDHLHALPLL HVQPTRPERW LSWAGWFDAH GLDAPAAARG VTFNSYALVI HAALLGEGVA LGWSPLVDEL VASGQLVKLV DAPVVTSRGY FLVRPPQRPE TDATHVFRRW LLDACACA
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