Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4480 |
Symbol | |
ID | 4313372 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 1421686 |
End bp | 1423890 |
Gene Length | 2205 bp |
Protein Length | 734 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638152319 |
Product | TonB-dependent siderophore receptor |
Protein accession | YP_776364 |
Protein GI | 115359226 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.938344 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAACA GGACCCCGTT CGCGAGCGCG CTCGCGCTGG CCTTTGCTTT GCCTATCGCT TCGCCTGCAC TCGCTCAGAG CACGAGCGCC GAACCGTCGC CGGCCGCCGC CGCGAAACCG GGCGATGCGC CGCCGGCTGC CGCCGCCGCG CGCGAAACGC TGCCGACTAT CAGCGTGTCG GGGCAGGCCG TGCAACAGGA CTTCCAGGCC GAACGTTCGA CCGTCGGCGC GAAAACCCCG ACCGCGTTGC GCGACATTCC GCAGTCGGTC ACGGTGATCA ACAAGGCGCT GATGGAATCG CAAGGGCTCA CGTCGTTCCA GGACGCGCTG CGCAATGCGC CGGGCATCAC GATCGGCGGC GCGGAAGGCG GGCAGATCGG CAACAACATC AACCTGCGCG GCTTCACCGC GCAGAACGAC ATCTATCTCG ACGGCTTTCG CGACCGCAAC CAGTATTACC GCGACACGTT CGACCTCGAT TCCGTCGAGG TGCTGTACGG CCCGTCGTCG ATGCTGTTCG GACGCGGTTC GACGGGCGGC GTGATCAACC AGGTGTCGAA GAAGGCGAAC CTGAAGCCGT CGGCCGAGGT GTCGACGACG ATCGGCACCA ACGACCGCTA CCGCACGAGC GTCGACCTGA ACCGGCCGCT GGGCGCGACG TCGGCGTTCC GCATCAACGC GTTCGGCCAG TCGCTCGGCT CGACGCGCGA CGTGATGAAG AACAAGGACT ACGGGATCGC ACCGGAGCTG CGCTTCGGGA TCGGCACGCC GACCGAGGTG ACGCTGTCCG CGCTGATCCA GCACAACTAC GACATGCCCG ACTACGGCGT GCTCGCGGTC AACGGCCATC CGGCGCCGGT GCCGAAGAAC ACCTTCTATG GCCTCACCGA CGATCGCACG ATCCAGGACG TGCAGACCGT GTCCGCACGC ATCGATCATC GGGTCAACGA TGCGCTGACG ATCAGCAACC GCACGTCGTT CTCGCACTCG ATGACCGATG CGCGCGAGAC GGCCGCGAAC GCGGTGCTGA CCGGGCCGCT GTCGTCGAGC ACCGCGCTGA CGAACGGTAA CTACACGTCG TTGCCGATGT CCGCGCTGTA CGTGAGGCTC GCGAGCCACG ACCGCGTGAT CGAAAACCAT TCGGTCGACA ACGACACGAT GGCGCATTTC AAGTTCGACA CGGGTTTCGT GAAGCACGAC CTGATCGGCG GTGTCGAGGT CGGCCACGAC AGTTACACGA ACCAGGCGTA CACGCGCAGC GGTCTGCCGA TCCTGTCGCT GATCAACCCG GCCTACCTGG CGTCGACGCC GACCAACGCG ACGCAGACGC CGGCCAACCA CGCCGAATCG GGCGCGACCA CGCTCGCGGC GTACCTGAAC GACACGGTGT CGATCGGCCG CGACTGGAAA TTCGTGGGCG GGCTGCGCTG GGATCGCTTC CAGGCGCATC TCGCGAACAC GGTGAGCGCG CCCCGCTACG CATCGCAGAC CAACTATTTC ACGAGCGTGC GGGCCGGCGT GATCTACCAG CCGACCGAAT CGCAGTCGTA CTACTTCTCG TACGGCACGT CGTTCAACCC GTCGCTCGAG ACGCTGACGG TCACGAACAA CACGCAGAAC CTGTCGCCCG AGCACACGAA GTCGTACGAG GTCGGCGGCA AGTGGGATCT GCTCAACGAC AACCTGTCGG TCACGTCGGC GCTGTTCCAG CAGGAGAAGA GTAACGCGCG CACGCAGACG TCGACGGGTG AATACCTGCT CGAAGGCGAC GTTCGCGTGC GCGGCTTCCA GGCGAGCGTG ACGGGCCACA TCACGCCGAA GTGGCAGGTG TTCGGCAGCT ACACGTACAT GAACGGCGTG ATCCTGGGCG CGCGCGACGG CACGCAGGGC AAGACGCTCG CGAATACGCC GCGCAACACG TTCACGCTGT GGACCACGTA TGCGTTCACG CCGCACTGGG AGATCGGCGG CGGTCCGACG TACATGTCGG GCCGCTACGC GGCGAACACG GACTACGTGC AGGTGGGCGG CTACACGCGC TGGGATGCGA CGGCCGCGTA TCACGCGAAG CAGTGGGACC TGCGCCTGAA CCTGCTGAAC CTGACCAACA AGTTCTATTA CGATGCGCTG ATCCAGTCGG ACGGCGGCCG TGCGGTGCCG GGCGTCGGGC GCACGTTCCT CGCGACGCTC GACTACCGGT TCTGA
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Protein sequence | MLNRTPFASA LALAFALPIA SPALAQSTSA EPSPAAAAKP GDAPPAAAAA RETLPTISVS GQAVQQDFQA ERSTVGAKTP TALRDIPQSV TVINKALMES QGLTSFQDAL RNAPGITIGG AEGGQIGNNI NLRGFTAQND IYLDGFRDRN QYYRDTFDLD SVEVLYGPSS MLFGRGSTGG VINQVSKKAN LKPSAEVSTT IGTNDRYRTS VDLNRPLGAT SAFRINAFGQ SLGSTRDVMK NKDYGIAPEL RFGIGTPTEV TLSALIQHNY DMPDYGVLAV NGHPAPVPKN TFYGLTDDRT IQDVQTVSAR IDHRVNDALT ISNRTSFSHS MTDARETAAN AVLTGPLSSS TALTNGNYTS LPMSALYVRL ASHDRVIENH SVDNDTMAHF KFDTGFVKHD LIGGVEVGHD SYTNQAYTRS GLPILSLINP AYLASTPTNA TQTPANHAES GATTLAAYLN DTVSIGRDWK FVGGLRWDRF QAHLANTVSA PRYASQTNYF TSVRAGVIYQ PTESQSYYFS YGTSFNPSLE TLTVTNNTQN LSPEHTKSYE VGGKWDLLND NLSVTSALFQ QEKSNARTQT STGEYLLEGD VRVRGFQASV TGHITPKWQV FGSYTYMNGV ILGARDGTQG KTLANTPRNT FTLWTTYAFT PHWEIGGGPT YMSGRYAANT DYVQVGGYTR WDATAAYHAK QWDLRLNLLN LTNKFYYDAL IQSDGGRAVP GVGRTFLATL DYRF
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