Gene Bamb_4479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4479 
Symbol 
ID4313371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1420958 
End bp1421641 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content66% 
IMG OID638152318 
Productputative hydroxylase 
Protein accessionYP_776363 
Protein GI115359225 
COG category[S] Function unknown 
COG ID[COG3128] Uncharacterized iron-regulated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGTCC ACATCCCGAA CGTTCTGACG CCCGAGCAGG TGAGCATGGT GCGCGACCGG 
CTCGACCGCG CGGGCGACGC GTGGGTCGAC GGCCGTGCGA CGGCTGGCTA TACGGGTGCG
CCGGTCAAGC GCAACCAGCA GATCGCCGAG CATTCGCCTA TCGCGCGCGA ACTCGGCGAC
GTAATCCTCG CCGCGCTCGA GCGCAATCCG CTGTTCATCA GCGCGGCGCT GCCGAACCAG
GTCTATCCGC CGCTGTTCAA CCGCTATGAA GGCGGGATGA CGTTCGGCAG TCACGTCGAC
GGCGCGGTGC GCGTGCTGCC GAACGGCGTG AAGCTGCGCA CCGACGTGTC CGTCACGCTG
TTCCTGTCCG CGCCCGATGA ATACGACGGC GGCGAACTCG TGATCGAGGA CGCGTACGGC
GTGCAGCAGG TCAAGCTGCC GGCCGGCGAC ATGATCGTCT ATCCGGCGAC GAGCCTGCAC
CAGGTCACGC CGGTCACGCG CGGTGTGCGC GTCGCGAGCT TCTTCTGGGT GCAGAGCCTC
GTGCGCAGCG ATGCGCAGCG CGCGCTGCTG TTCGACATGG ACACCGCGAT CCAGCGGCTC
AACGCGAGCG GCGCCGATAC CGACGCATGC CGCAGCCTCG TTGGTTGTTA TCACAATCTT
TTGCGAATCT GGAGCGAAAC GTGA
 
Protein sequence
MLVHIPNVLT PEQVSMVRDR LDRAGDAWVD GRATAGYTGA PVKRNQQIAE HSPIARELGD 
VILAALERNP LFISAALPNQ VYPPLFNRYE GGMTFGSHVD GAVRVLPNGV KLRTDVSVTL
FLSAPDEYDG GELVIEDAYG VQQVKLPAGD MIVYPATSLH QVTPVTRGVR VASFFWVQSL
VRSDAQRALL FDMDTAIQRL NASGADTDAC RSLVGCYHNL LRIWSET