Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4417 |
Symbol | |
ID | 4313311 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 1353409 |
End bp | 1354293 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638152258 |
Product | LysR family transcriptional regulator |
Protein accession | YP_776303 |
Protein GI | 115359165 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0255776 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGGTA GAAAGGGAGC TAATACCTTG GGACGCTCGC TCGAAATCGA CCTGCTGCGC TCGTTCGTCG TCATCGCCGA GGTGCGCTCG CTGAGCCGCG CGGCGGCGCG GGTCGGCCGC ACGCAGTCGG CGCTCAGCCA GCAGATGCGC CGGCTCGAGG AAAGCGTCGA CCAGCCGCTG TTCCAGCGCA CCGGCCGCGG CGTGCTGCTG ACGCACCCCG GCGAGCGGCT GCTCGTGCAT GCGCAGCGGA TCCTCCGGCA GCATGACGAG GCGATGGCTG ATCTGTGTGG CACGGGGCTG TCGGGGACGA TCCGGTTCGG GTGTCCGGAC GATTACGCCC AAGTGTGGCT GCCGTCGCTG TTGCGGCAGT TTTCGAGCCA GCATCCGCAG GCGATCGTCG AAGTCGTGTG CGGGCCGACG CCGCGGCTCG TCGAGCAGTT GGAGAAGCGC GCAGTGGATC TGGCGATGAT TTCCGTGCCG GATGATGGCG CGACGGGCGA CATCATCCGT CGCGAGCAAC TGGTCTGGAT CGGTTATCCG GGCCTCGATG CCGCGCAGTT CGAGCCGTTG CCGCTCGCGC TTTCCGATCC CGATACGCTC GATCACATCG CGGCCCGCGA CGCGTTGCAT CGCGCGGGCC GCGATTATCG CGTCGCGTAT GCGAGCAGCA GCCTCGCGGG GTTGACCGCG CTCGTGCGTT CGGGGCAGGC GTTTGCAGTG ATGACGCAGA CGGCGGTGCC GGCCGATCTG GCGATTCTCG CTGGCGATCG CGGGCTGCCG CCGCTGCCGG CGGTGGGCAT TACGCTGCGC TTCGACCGGA AGCGGCCGTC GCATCTGGCG GCAGCGTTTG CGGAGCATAT CCGGGCGGTG TTGCCGGTGC TGTGA
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Protein sequence | MQGRKGANTL GRSLEIDLLR SFVVIAEVRS LSRAAARVGR TQSALSQQMR RLEESVDQPL FQRTGRGVLL THPGERLLVH AQRILRQHDE AMADLCGTGL SGTIRFGCPD DYAQVWLPSL LRQFSSQHPQ AIVEVVCGPT PRLVEQLEKR AVDLAMISVP DDGATGDIIR REQLVWIGYP GLDAAQFEPL PLALSDPDTL DHIAARDALH RAGRDYRVAY ASSSLAGLTA LVRSGQAFAV MTQTAVPADL AILAGDRGLP PLPAVGITLR FDRKRPSHLA AAFAEHIRAV LPVL
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