Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4371 |
Symbol | |
ID | 4313265 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 1307534 |
End bp | 1308454 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638152211 |
Product | LysR family transcriptional regulator |
Protein accession | YP_776257 |
Protein GI | 115359119 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.120427 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0114569 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAGTTGT CGTTTGAAGT TCTGGAGGCG CTCGATGCGA TAGACCGCGC GGGCACGTTC GCGGAGGCAG CCGTGCTGAT TCATCGCGTA CCGTCTGCAC TGTCCTACCT GGTGCAAAAG GCAGAGAGCG ATCTCGGCGT GATCCTGTTC GATCGCAGCG GGCGGCGTGC GCAGTTGACC GAGGCGGGAC GACTGCTCGT AGAGGATGGT CGTCGTCTGC TCCAGGCGGG GCGGGAGCTG GAGAGCAAGG TCCGGGGCGT CCACGCGGGT TGGGAGGCCG AACTCAGACT GTGCCTCGAC GAGATTCTGC CGCTCCCGTC GTTGTGGCCG CACGTGCGCG CCTTCTATGA CATGGAGCTG ACCACACGGC TACGTCTATC GACCGAAGTG CTCGGTGGCG TATGGGACGC GCTCGTGACG GGGCGCGCGG ATATCGCGAT CGGTGCCGCA GGGGAGCCGC CACACGCGCC GAACATCGCG GCAAGGCCGA TCGGCCTGTT GCGCCATGTT TTCGTCGTAG CGCCGCATCA CCCGCTCGCC GCTGTCGAAC AACCGCTCGA CAGCGATACC ATTTCAAGTC ATCGCGGCGT CATCATCAGC GACACGTCGC GCGCCCTCGA GCCCCGATCG GTGGCGATTC ATGACGGACA ACCGGTCATC ATCGTGCCGA CGCTGGCCGC CAAACTCGAC CTCCTTTGCG AAGGCATGGC CGTCGGCATG CTGCCCGCGC CCGTCGTCGA GGAGGCGATC CGTCAGGGAA AGCTCGTCGA ACGGCGCGTA ATCGGCGTGC GGGACCATAC AACCTGCTAC CTCGGCTGGC GTGAGGACAA GACCGGACGC GCATTGAAAT GGTGGATCAA CCGACTGGAT CAGATCGATC TGATATCCAC GCTGTTCAGC ACGCGCGGCG TCGCGGCCTG A
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Protein sequence | MKLSFEVLEA LDAIDRAGTF AEAAVLIHRV PSALSYLVQK AESDLGVILF DRSGRRAQLT EAGRLLVEDG RRLLQAGREL ESKVRGVHAG WEAELRLCLD EILPLPSLWP HVRAFYDMEL TTRLRLSTEV LGGVWDALVT GRADIAIGAA GEPPHAPNIA ARPIGLLRHV FVVAPHHPLA AVEQPLDSDT ISSHRGVIIS DTSRALEPRS VAIHDGQPVI IVPTLAAKLD LLCEGMAVGM LPAPVVEEAI RQGKLVERRV IGVRDHTTCY LGWREDKTGR ALKWWINRLD QIDLISTLFS TRGVAA
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