Gene Bamb_4371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4371 
Symbol 
ID4313265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1307534 
End bp1308454 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content64% 
IMG OID638152211 
ProductLysR family transcriptional regulator 
Protein accessionYP_776257 
Protein GI115359119 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.120427 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0114569 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGTTGT CGTTTGAAGT TCTGGAGGCG CTCGATGCGA TAGACCGCGC GGGCACGTTC 
GCGGAGGCAG CCGTGCTGAT TCATCGCGTA CCGTCTGCAC TGTCCTACCT GGTGCAAAAG
GCAGAGAGCG ATCTCGGCGT GATCCTGTTC GATCGCAGCG GGCGGCGTGC GCAGTTGACC
GAGGCGGGAC GACTGCTCGT AGAGGATGGT CGTCGTCTGC TCCAGGCGGG GCGGGAGCTG
GAGAGCAAGG TCCGGGGCGT CCACGCGGGT TGGGAGGCCG AACTCAGACT GTGCCTCGAC
GAGATTCTGC CGCTCCCGTC GTTGTGGCCG CACGTGCGCG CCTTCTATGA CATGGAGCTG
ACCACACGGC TACGTCTATC GACCGAAGTG CTCGGTGGCG TATGGGACGC GCTCGTGACG
GGGCGCGCGG ATATCGCGAT CGGTGCCGCA GGGGAGCCGC CACACGCGCC GAACATCGCG
GCAAGGCCGA TCGGCCTGTT GCGCCATGTT TTCGTCGTAG CGCCGCATCA CCCGCTCGCC
GCTGTCGAAC AACCGCTCGA CAGCGATACC ATTTCAAGTC ATCGCGGCGT CATCATCAGC
GACACGTCGC GCGCCCTCGA GCCCCGATCG GTGGCGATTC ATGACGGACA ACCGGTCATC
ATCGTGCCGA CGCTGGCCGC CAAACTCGAC CTCCTTTGCG AAGGCATGGC CGTCGGCATG
CTGCCCGCGC CCGTCGTCGA GGAGGCGATC CGTCAGGGAA AGCTCGTCGA ACGGCGCGTA
ATCGGCGTGC GGGACCATAC AACCTGCTAC CTCGGCTGGC GTGAGGACAA GACCGGACGC
GCATTGAAAT GGTGGATCAA CCGACTGGAT CAGATCGATC TGATATCCAC GCTGTTCAGC
ACGCGCGGCG TCGCGGCCTG A
 
Protein sequence
MKLSFEVLEA LDAIDRAGTF AEAAVLIHRV PSALSYLVQK AESDLGVILF DRSGRRAQLT 
EAGRLLVEDG RRLLQAGREL ESKVRGVHAG WEAELRLCLD EILPLPSLWP HVRAFYDMEL
TTRLRLSTEV LGGVWDALVT GRADIAIGAA GEPPHAPNIA ARPIGLLRHV FVVAPHHPLA
AVEQPLDSDT ISSHRGVIIS DTSRALEPRS VAIHDGQPVI IVPTLAAKLD LLCEGMAVGM
LPAPVVEEAI RQGKLVERRV IGVRDHTTCY LGWREDKTGR ALKWWINRLD QIDLISTLFS
TRGVAA