Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4356 |
Symbol | |
ID | 4313250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 1282837 |
End bp | 1283499 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638152196 |
Product | two component transcriptional regulator |
Protein accession | YP_776242 |
Protein GI | 115359104 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00111042 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.00000437588 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGCGCGTAC TGCTCGTCGA GGACGATCCG CTGATCGGCA GCGGTCTCGA ACAGGGCCTC AAACAGGAAG GCTTCGCGGT CGACTGGGTC AAGGACGGCG ACGCCGCGTC GCTCGCGCTG CGCTCGACCG CGTATGGCCT CCTGCTGCTC GACCTCGGAC TGCCGAACCG CGACGGCCTG TCGGTGCTCG CGTCGCTGCG CCGCCGCGAC GAAACCCTGC CCGCGATCAT CATCACCGCG CGCGACGGCG TGCCGGACCG CATCGCCGGC CTCGACAGCG GCGCCGACGA CTACCTCGTC AAGCCGTTCG TGCTCGAGGA GCTGCTCGCC CGCATCCGCG CGGTCAACCG CCGCCATGCG GGGCGCGCGC AAACGACGCT CGCGATCGGC CCGCTGCGGC TCGATCCGGT CAAGCACCTG GTCTGGCTCA ACGACGACGA AGTCACGCTG TCGCCGAAGG AATTCGTGCT GCTGCACGAG CTGATGCGCG ACCCCGGCGC GGTAATCTCG CGCGAACAGT TCGAGGAACG GCTATACAGC TGGGGCGAGG AAATCGAGAG CAACGCAGTG CAGGTGCACA TCCACAACCT GCGCAAGAAA CTCGGCCACG ACATGATCCG CACCGTGCGC GGCGTCGGCT ACCGGATCGG TGACGGCGCA TGA
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Protein sequence | MRVLLVEDDP LIGSGLEQGL KQEGFAVDWV KDGDAASLAL RSTAYGLLLL DLGLPNRDGL SVLASLRRRD ETLPAIIITA RDGVPDRIAG LDSGADDYLV KPFVLEELLA RIRAVNRRHA GRAQTTLAIG PLRLDPVKHL VWLNDDEVTL SPKEFVLLHE LMRDPGAVIS REQFEERLYS WGEEIESNAV QVHIHNLRKK LGHDMIRTVR GVGYRIGDGA
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