| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4201 |
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| Symbol | |
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| ID | 4313096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 1120591 |
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| End bp | 1121544 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638152042 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_776088 |
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| Protein GI | 115358950 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.525633 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCACG CATCGCCCAC CGCCTCGCCC GCTTCTTCCC CGCGCCGCGG CGCCCGCTTC
GCGGCCCTCG CCACGCTTGC CGTCGCGGCC GTGCTGCCGG CCGTCGCGCA CGCCGCGCCG
CTGCGCATCG GCATGACGTT CCAGGAGCTG AACAACCCGT ATTTCGTGAC GATGCAGAAG
GCGCTGAACG ATGCGGCCGC CTCGATCGGC GCGCAGGTCG TCGTCACCGA CGCGCATCAC
GACGTCAGCA AGCAGGTGAG CGACGTCGAG GACATGCTGC AGAAGAAGAT CGACATCCTG
CTCGTGAACC CGACCGACTC GACCGGCATC CAGTCCGCGA TCACGCAGGC GAAGAAGGCC
GGCGCGGTGG TCGTGGCCGT CGATGCGAAC GCGAACGGCC CGGTCGATTC GTTCGTCGGC
TCGAAGAACT ACGACGCCGG CGTGATGTCC TGCGAATACC TCGCGAAGGC GATCGGCGGC
AGCGGCGAGG TGGCGATCCT CGACGGCATT CCGGTCGTGC CGATTCTCGA ACGCGTGCGC
GGCTGCAAGG CCGGGCTCGC GAAATTCCCG AACGTGAAGC TGGTCGACAC GCAGAACGGC
AAGCAGGAGC GCGCGACCGC GCTGTCGGTG ACCGAAAACA TGATCTCCGC GCATCCGAAC
CTGAAGGGCA TCTTCAGCGT GAACGACGGC GGCTCGATGG GCGCGCTCGC CGCGATTGAA
GGTTCCGGCA AGGACATCAA GCTGACGAGC GTCGACGGCG CGCCCGAGGC GATTGCCGCG
ATCCAGAAGC CGAACTCGAA GTTCATCGAG ACGACCGCGC AGTTTCCGGC CGACCAGGTG
CGCATCGCGC TCGGCATCGC GATCGCGCGC AAGTGGGGCG CGACGGTGCC GAAGGCGATT
CCGGTCGACG TGAAGGTCGT CGATCGCGGC AACGCGAAGG GGTTCAGCTG GTGA
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| Protein sequence | MTHASPTASP ASSPRRGARF AALATLAVAA VLPAVAHAAP LRIGMTFQEL NNPYFVTMQK
ALNDAAASIG AQVVVTDAHH DVSKQVSDVE DMLQKKIDIL LVNPTDSTGI QSAITQAKKA
GAVVVAVDAN ANGPVDSFVG SKNYDAGVMS CEYLAKAIGG SGEVAILDGI PVVPILERVR
GCKAGLAKFP NVKLVDTQNG KQERATALSV TENMISAHPN LKGIFSVNDG GSMGALAAIE
GSGKDIKLTS VDGAPEAIAA IQKPNSKFIE TTAQFPADQV RIALGIAIAR KWGATVPKAI
PVDVKVVDRG NAKGFSW
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