Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4196 |
Symbol | |
ID | 4313091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 1114536 |
End bp | 1115294 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638152037 |
Product | short chain dehydrogenase |
Protein accession | YP_776083 |
Protein GI | 115358945 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGACGC GATTCGATTT CAGCGGTTCA CGGGTGCTCG TCACCGGCGC GTCGAGCGGG ATCGGGCGCG CATGCGCGGT TGCGCTGGCG CATGCGGGCG CACGGGTCGT CGCGGCGGGG CGCGATGCGG CCGCGCTTGA CGTGCTGGCC GGCGAAATCG CCTGCGATAT CTTGCGCGTC GATATCGGCG CCGATGAACA GGCGATCGAT GCGGCGCTTG CCGCGTACGA CGCGTTCGAT GCGCTCGTCA ATTGCGCGGG CATCGCGTCG CTCGAGCCGG CGCTCGAGGT CAGCGCCGAG CACTTCGATC GCGTGATGGC CGTCAATGCG CGTGGCGCTG CGCTCGTCGC ACGGGCCGTC GCGCGGAAGA TGATCGCGCG CGACGGGCGG GGCGCCGTGC GTGCGCGTGG CAGCATCGTC AACGTATCGA GCCAGGCGGC GCTCGTCGGC TTGCCGGAGC ATCTGAGCTA TTGCGCGTCG AAGGCGGCGC TCGACGCGAT TACGCGCGTG CTGTGCATCG AACTTGGCGC GCACGGGATT CGTGTGAACA GCGTGAACCC GACCGTCACG CTCACGCCGA TGGCGCAATT CGCGTGGAGC GACCCGGAAA CGCGCGCGCC GATGCTCGCG GCGATTCCGC TCGGGCGCTT CGCGGAGCCG GACGAGGTGG TCGAGCCGAT CCTGTTCCTG CTGAGCGACG CGGCGTCGAT GATCAGCGGG GTGTCGCTGG CGATCGATGG CGGGTATACG GCGCGGTAG
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Protein sequence | MKTRFDFSGS RVLVTGASSG IGRACAVALA HAGARVVAAG RDAAALDVLA GEIACDILRV DIGADEQAID AALAAYDAFD ALVNCAGIAS LEPALEVSAE HFDRVMAVNA RGAALVARAV ARKMIARDGR GAVRARGSIV NVSSQAALVG LPEHLSYCAS KAALDAITRV LCIELGAHGI RVNSVNPTVT LTPMAQFAWS DPETRAPMLA AIPLGRFAEP DEVVEPILFL LSDAASMISG VSLAIDGGYT AR
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