Gene Bamb_4192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4192 
Symbol 
ID4313087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1111705 
End bp1112388 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content64% 
IMG OID638152033 
Productputative hydroxylase 
Protein accessionYP_776079 
Protein GI115358941 
COG category[S] Function unknown 
COG ID[COG3128] Uncharacterized iron-regulated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.540469 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCTTC ATATCCCCGG CGTGCTGACC AACGCGCAGG TCGCGCAATG CCGCGAGCTG 
CTCGATGCTG CCCACTGGGT CGACGGCAAT GCGACGTCCG GCGCGCAGTC GGCGCTGGCC
AAACGCAACC GGCAGTTGCC GGAAGGATCA CCCGTCGCGC GGGCGGTCGG CGATGCGATC
CAGGATGCGC TGGCGCGTCA TGCGCTGTTC TTTTCCGCAG CGTTGCCATT GAAGGTGTTT
CCGCCGCTGT TCAATCGCTA TGCAGGCGGC GAGACGTTCG GCACGCATGT GGACAACGCG
ATCCGGCTGC TGCGCGGCAC GGATTTCCGC GTGCGCAGCG ATCTGTCGGC GACGCTGTTT
CTCGAGGAGC CCGATGCGTA CGACGGTGGC GAGCTGTGCG TGGAAGATAC GTACGGCGTG
CATCGCGCGA AGCTGCCGGC CGGCGATCTC GTGCTGTATC CGGCGTCGAG CCTGCACCAC
GTGACGCCCG TTACCCGTGG CGAACGCGTT GCGTCGTTCT TCTGGATCCA GAGCATGGTG
CGCGACGACG GCGACCGCAC GCTGCTGTTT CAGCTCGATA CGCAGATTCA GGCATTGTCC
GCGGAAAAAG GCGCGAAGGA TCCGATGGTC ATTTCATTGA CGGGGATTTA TCACAACCTG
TTGAGGAAGT GGGCGGATGC GTAG
 
Protein sequence
MMLHIPGVLT NAQVAQCREL LDAAHWVDGN ATSGAQSALA KRNRQLPEGS PVARAVGDAI 
QDALARHALF FSAALPLKVF PPLFNRYAGG ETFGTHVDNA IRLLRGTDFR VRSDLSATLF
LEEPDAYDGG ELCVEDTYGV HRAKLPAGDL VLYPASSLHH VTPVTRGERV ASFFWIQSMV
RDDGDRTLLF QLDTQIQALS AEKGAKDPMV ISLTGIYHNL LRKWADA