Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4183 |
Symbol | |
ID | 4313078 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 1103017 |
End bp | 1103811 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638152024 |
Product | AraC family transcriptional regulator |
Protein accession | YP_776070 |
Protein GI | 115358932 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.928352 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATCGCA TCACCCATTA CCGACGGACC GACGAAGGAA TCGAGGCGAT CAGCCTCGAG TCCGATCGCG CGTTTCCGCG GCACGCGCAT GATGAATTCG GGGTCGGCGT GATCGTCAGC GGCGCGCATC GGTCGTGGAG CGGCCGCGGG CAGGTCGACG CGCTGGCCGG CGACGCGATC ATGGTCAATC CGGGCGAGAT GCACGACGGG ACGCCGATCG ATGCGGGCAC GGGCCGGCGC TGGCGGATGC TGTACCTCGC GCCCGCGCTG GTCGCGAGCG TCGCGACGGA AGAAGGCCTC GAGGGCGTCG AGTTCACGCA TCCGGCCGTG CGCGACGCAC GGCTCGCCGC CGCCTTCGGC CGGTTGCATG CGCGGATCGT CGCAGGGGAA ACACTGCCGC TCGCCCGCGA CGAGGCCCTC GTGACGCTGG TCGCCGCGCT GCTCGCACGG CATTCGAACC GCGCGCTGCC GGCCGCCGGC GTCGCGCCGG CGATCCGCAT GGCCCGCGAG CGACTCGATG CGGCACCCGC CGCACCCGTT TCGCTTGCCG AGTTGGCCAG CCTGAGCGGC GTGAGCCGCT TCCAGCTGCT GCGCGGGTTC GCGCGCAAGC TCGGCATCAC GCCGCACGCG TATCTGCTGC AATCGCGCAC GCGACTGGCT CGTGCACTGC TTGCAAGCGG CCGGCCGATC GCGGATGCCG CGGCCGAAGC CGGATTCGCC GACCAGAGCC ATCTGACGCG CGCATTCGCG CGCCAGTTCG GCATCACGCC GGGGCGATTC ATCCAGGCCG GCTGA
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Protein sequence | MHRITHYRRT DEGIEAISLE SDRAFPRHAH DEFGVGVIVS GAHRSWSGRG QVDALAGDAI MVNPGEMHDG TPIDAGTGRR WRMLYLAPAL VASVATEEGL EGVEFTHPAV RDARLAAAFG RLHARIVAGE TLPLARDEAL VTLVAALLAR HSNRALPAAG VAPAIRMARE RLDAAPAAPV SLAELASLSG VSRFQLLRGF ARKLGITPHA YLLQSRTRLA RALLASGRPI ADAAAEAGFA DQSHLTRAFA RQFGITPGRF IQAG
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