Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4179 |
Symbol | |
ID | 4313074 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 1099380 |
End bp | 1100093 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638152020 |
Product | short chain dehydrogenase |
Protein accession | YP_776066 |
Protein GI | 115358928 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0383999 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACACG ACCTGACAGG CAAGGCAGTC GCGATCACCG GCGGATTCGG CCATCTCGGC GTCGCCACGG CCGCATGGCT CGGCCAACGC GGCGCCCGCG TCGCGCTGAT CGGCCGCGGC GCGGCGCCGG ACGCGCAGGC GTTGCCCGGC GTGCCGGCCG ATGCGCTGCG CATCGGCGGC ATCGACCTCG TCGATCCGCA GGCGGCCGCG CGCGCGCTCG ACACCGTGAA TCGCGAATTC GGCAGGGTCG ACGCGCTGCT GAACATCGCC GGTGCGTTCA CATGGCAGAC GATCGCCGAC GGCGATGCAG CCACGTGGGA CCGCATGTAC GAACTGAACG TGAAGACGGC GCTGAACGCG TCGAAGGCCG CGCTGCCGTA TCTGGCGGCG AGTCCGGCCG GCCGTATCGT CAACATCGGG GCCGGCGCGG CGTTCAAGGC AGGCGCGGGC ATGGGCGCCT ATGCGGCGGC GAAGGCAGGC GTCGCGCGGC TCACCGAGGC ACTGGCGGCG GAGTTGCTCG ATCGCGGCGT GACCGTGAAC GCGCTGCTGC CGAGCATCAT CGACACGCCG CCGAACCGTG CGGACATGCC GGACGCGGAC TTCTCGCGCT GGGTCCGGCC CGAACAGCTC GCGGCGACGA TCGGGTTCCT GCTGTCGGCC GATGCGCAGG CGATTACCGG CGCCTCGATT CCGGTGAGTG GGCGCGTGGA GTAG
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Protein sequence | MEHDLTGKAV AITGGFGHLG VATAAWLGQR GARVALIGRG AAPDAQALPG VPADALRIGG IDLVDPQAAA RALDTVNREF GRVDALLNIA GAFTWQTIAD GDAATWDRMY ELNVKTALNA SKAALPYLAA SPAGRIVNIG AGAAFKAGAG MGAYAAAKAG VARLTEALAA ELLDRGVTVN ALLPSIIDTP PNRADMPDAD FSRWVRPEQL AATIGFLLSA DAQAITGASI PVSGRVE
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