Gene Bamb_4123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4123 
Symbol 
ID4313018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1043811 
End bp1044272 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content61% 
IMG OID638151964 
Productsignal-transduction protein 
Protein accessionYP_776010 
Protein GI115358872 
COG category[T] Signal transduction mechanisms 
COG ID[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00087962 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0202046 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGA CTGTCGCGCA AATTCTCAAG GCCAAGCCGG ATTCCGGCCG CACGATCTAC 
ACCGTCACGA AAACCGATTT CGTCTACGAC GCCATCAAGC TGATGGCCGA AAAGGGAATC
GGCGCACTGC TGGTCGTTGA AGGTGACGAC ATCGCCGGCA TCGTTACCGA GCGCGACTAC
GCGCGCAAGG TCGTGCTGCA GGACCGTTCG TCGAAAGCCA CCCGCGTCGA GGAAATCATG
ACGGCCAAGG TGCGCTACGT CGAACCGTCG CAATCCACCG ACGAGTGCAT GGCGCTGATG
ACCGAACACC GGATGCGCCA CCTGCCCGTT CTGGACGGCG GCAAGCTGAT CGGCCTGATC
TCGATCGGCG ACCTGGTGAA GAGCGTGATT GCCGACCAGC AATTCACGAT CAGCCAGCTG
GAACACTATA TCCACGGCAC CCCGTCGGTC ACGTCCGTCT GA
 
Protein sequence
MSTTVAQILK AKPDSGRTIY TVTKTDFVYD AIKLMAEKGI GALLVVEGDD IAGIVTERDY 
ARKVVLQDRS SKATRVEEIM TAKVRYVEPS QSTDECMALM TEHRMRHLPV LDGGKLIGLI
SIGDLVKSVI ADQQFTISQL EHYIHGTPSV TSV