| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4061 |
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| Symbol | |
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| ID | 4312956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 981311 |
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| End bp | 982291 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638151902 |
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| Product | aliphatic sulfonate ABC transporter periplasmic ligand-binding protein |
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| Protein accession | YP_775948 |
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| Protein GI | 115358810 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00627715 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.237029 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCGTT TCACCCGCTG GATCACCCGC ACCGCCGCCG TCGCGCTCGT GGCGCTCGCC
GCCACGTCGA CCTTTGCGCA GGGCGGCGCC GACAAGGTCG TGCGCATCGG CTACCAGAAG
GCCGGCCTGC TGTCGATCAT CAAGGCACAA GGCTCGCTCG AAGCACGGCT CAAGCCGCTC
GGCTATGGCG TGCAGTGGTT CGAATTCCCC GCCGGCCCGC AGCTGCTCGA GGCGTTGAAC
GCGAACAGCA TCGACTTCGG CTATACGGGC GCGCCGCCGC CCGTGTTCGC GCAGGCGGCC
GGCGTGCGGT TCGTCTATGT CGGCGCGGAG CCGCCGGCCC CGCACAACGA AGCCGTGTTC
GTGAAGGCCG ATTCGCCGAT CCGTTCGGTC GCCGAGCTGC GCGGCAAGAA GGTCGCGCTG
CAGAAAGGCT CGAGCGCGAA CTACCTGCTG CTCGAAGCGC TGAAGAAGGC CGGCGTGCGC
TACGACGAAA TCCACCCCGT GTATCTCGCG CCGGCCGACG CGCGCGCGGC GTTCGAGAGC
GGCAACGTCG ACGCGTGGGT CGTATGGGAT CCGTACTATG CGGCCGCGCA GAATGCGCTG
AAGGTACGCA CGCTGTCCGA CTATACGGGG CTCGCGGCAA CGAACAACTT CTACGAAGCG
ACGCGCGACT TCGCGCAGCA GCATCCGGAC CTGGTCGGCG CGATCCTGAA ACAGGCGCGC
GAAACGGGCC AGTGGGTCAA CGGGCATCCG GCCGACACGG CCGCGCTGCT CGCGCCGAAG
GTCGGCCTGC CGCAACCGCT CGTCGAGACG TGGATCAAGC GCGTGCCGTT CGGCGCGGTG
CCGCTCGACG ACCGGATCGT CGCGGCGCAG CAGCGGGTTG CCGATGCGTT CCATACGGCG
AAGTTGATTC CGCAAAAGCT GAGTGTTGCG GAGAATGCGT GGATCGACAC GAACGTCGCG
AGTGCGCTCG CGGCGAAGTA A
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| Protein sequence | MIRFTRWITR TAAVALVALA ATSTFAQGGA DKVVRIGYQK AGLLSIIKAQ GSLEARLKPL
GYGVQWFEFP AGPQLLEALN ANSIDFGYTG APPPVFAQAA GVRFVYVGAE PPAPHNEAVF
VKADSPIRSV AELRGKKVAL QKGSSANYLL LEALKKAGVR YDEIHPVYLA PADARAAFES
GNVDAWVVWD PYYAAAQNAL KVRTLSDYTG LAATNNFYEA TRDFAQQHPD LVGAILKQAR
ETGQWVNGHP ADTAALLAPK VGLPQPLVET WIKRVPFGAV PLDDRIVAAQ QRVADAFHTA
KLIPQKLSVA ENAWIDTNVA SALAAK
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