Gene Bamb_4041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4041 
Symbol 
ID4312936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp959389 
End bp960333 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content68% 
IMG OID638151882 
ProductLysR family transcriptional regulator 
Protein accessionYP_775928 
Protein GI115358790 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTGA GCGAGATCGA CCTCAACCTG CTGTTGCTGT TCCAGCGGTT GATGCAGGAG 
CGGCGTGTGT CGACCGTCGC CGAGCAGATG AACATGAGCC AGCCGGGCGT CAGCAACGCA
CTCGCGAAGC TGCGCCGCCG GCTCGGCGAT CCGCTGTTCG TGCGCGCGCC AGGCGGCGTG
GTCCCGACGC CCTTCGCGTT GCGCCTGGCC GAACCGGTTG CGCAGGCGCT GTCGACGCTG
CATGCCGCGC TCAATCCGGA GACCGGTTTC GATCCGCTGC GCGCATCGCG CACGATGACG
ATCGGCATGA CCGATATCGG CGAAGTCGTG TTCCTGCCCG CGTTGCTCGA ACATCTGGCG
CGCACGGCGC CGGGCATCGC GCTCAACACG GTGCGCAACA CGAGCGTCAA CCTCAGCGAC
GAGATGGCCG ACGGCCGCGT CGACCTCGCG ATCGGGCTGC TGCCGCAACT GCAGGGCGGG
TTCTATCAGC GCCGGCTGTT CGATCAGCGG TACGTGTGCC TGTTCCGGCG CGGGCATCCG
CTCGAAGACG CGCCGCTGAC GGTCGACGCA TGGCGGGATG CCGAGCATCT GGTCGTGGTG
TCGGCCGGCA CCGGTCACGG GCAGGTGGAC GACTGGCTGA AGCGGCGCCG CGTGAAGCGC
CGCGTGCGGC TGACGGTGCC GCATTTCATG AGCGTCGGCT ATATCCTGCA GCGCACCGAC
CTGATCGCGA CCGTGCCGGA ACATCTTGCG CTGCAACTGG CCGCACCGTT TTCGCTCGGC
TGGCGGGCGT TGCCGGTCAC GCTGCCGGGC GCGCCGATTC ACATGCTGTG GCATGCGCGC
GTGAATCAGG ACGAAGGCAA CCGGTGGCTA CGGGAGGTCG TGGTCAGCCT GTTCGCGGAC
ACCGGGACAC GCGCGCGAAA GGCCGCGCCG GCCCGCAGAA AATAG
 
Protein sequence
MELSEIDLNL LLLFQRLMQE RRVSTVAEQM NMSQPGVSNA LAKLRRRLGD PLFVRAPGGV 
VPTPFALRLA EPVAQALSTL HAALNPETGF DPLRASRTMT IGMTDIGEVV FLPALLEHLA
RTAPGIALNT VRNTSVNLSD EMADGRVDLA IGLLPQLQGG FYQRRLFDQR YVCLFRRGHP
LEDAPLTVDA WRDAEHLVVV SAGTGHGQVD DWLKRRRVKR RVRLTVPHFM SVGYILQRTD
LIATVPEHLA LQLAAPFSLG WRALPVTLPG APIHMLWHAR VNQDEGNRWL REVVVSLFAD
TGTRARKAAP ARRK