Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4041 |
Symbol | |
ID | 4312936 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 959389 |
End bp | 960333 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638151882 |
Product | LysR family transcriptional regulator |
Protein accession | YP_775928 |
Protein GI | 115358790 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACTGA GCGAGATCGA CCTCAACCTG CTGTTGCTGT TCCAGCGGTT GATGCAGGAG CGGCGTGTGT CGACCGTCGC CGAGCAGATG AACATGAGCC AGCCGGGCGT CAGCAACGCA CTCGCGAAGC TGCGCCGCCG GCTCGGCGAT CCGCTGTTCG TGCGCGCGCC AGGCGGCGTG GTCCCGACGC CCTTCGCGTT GCGCCTGGCC GAACCGGTTG CGCAGGCGCT GTCGACGCTG CATGCCGCGC TCAATCCGGA GACCGGTTTC GATCCGCTGC GCGCATCGCG CACGATGACG ATCGGCATGA CCGATATCGG CGAAGTCGTG TTCCTGCCCG CGTTGCTCGA ACATCTGGCG CGCACGGCGC CGGGCATCGC GCTCAACACG GTGCGCAACA CGAGCGTCAA CCTCAGCGAC GAGATGGCCG ACGGCCGCGT CGACCTCGCG ATCGGGCTGC TGCCGCAACT GCAGGGCGGG TTCTATCAGC GCCGGCTGTT CGATCAGCGG TACGTGTGCC TGTTCCGGCG CGGGCATCCG CTCGAAGACG CGCCGCTGAC GGTCGACGCA TGGCGGGATG CCGAGCATCT GGTCGTGGTG TCGGCCGGCA CCGGTCACGG GCAGGTGGAC GACTGGCTGA AGCGGCGCCG CGTGAAGCGC CGCGTGCGGC TGACGGTGCC GCATTTCATG AGCGTCGGCT ATATCCTGCA GCGCACCGAC CTGATCGCGA CCGTGCCGGA ACATCTTGCG CTGCAACTGG CCGCACCGTT TTCGCTCGGC TGGCGGGCGT TGCCGGTCAC GCTGCCGGGC GCGCCGATTC ACATGCTGTG GCATGCGCGC GTGAATCAGG ACGAAGGCAA CCGGTGGCTA CGGGAGGTCG TGGTCAGCCT GTTCGCGGAC ACCGGGACAC GCGCGCGAAA GGCCGCGCCG GCCCGCAGAA AATAG
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Protein sequence | MELSEIDLNL LLLFQRLMQE RRVSTVAEQM NMSQPGVSNA LAKLRRRLGD PLFVRAPGGV VPTPFALRLA EPVAQALSTL HAALNPETGF DPLRASRTMT IGMTDIGEVV FLPALLEHLA RTAPGIALNT VRNTSVNLSD EMADGRVDLA IGLLPQLQGG FYQRRLFDQR YVCLFRRGHP LEDAPLTVDA WRDAEHLVVV SAGTGHGQVD DWLKRRRVKR RVRLTVPHFM SVGYILQRTD LIATVPEHLA LQLAAPFSLG WRALPVTLPG APIHMLWHAR VNQDEGNRWL REVVVSLFAD TGTRARKAAP ARRK
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