Gene Bamb_4040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4040 
Symbol 
ID4312935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp957991 
End bp959205 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content70% 
IMG OID638151881 
Productsalicylate 1-monooxygenase 
Protein accessionYP_775927 
Protein GI115358789 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACGA ATCTGAGGAT CGCGATCGTC GGTGCCGGCA TCGGCGGCCT GACACTGGCG 
CTCGCGTTGC GCGAGCAGGG CATCGACGCG CAGCTGTACG AGCAGACCGA CGTGCTGCGC
GAGGTGGGGG CGGCCGTCGC GCTGTCGGCC AACGCGACGC GCTTCTACGA ACGGATGGGA
TTGCGTCCGG CTTTCGATGC GGTGTGCGCG GAGATTCCGG GCCTCGTCTA TCGCGACGGG
CGCAGCGGCG CGGTGATCGG CCATCATCGC GGCGAGCCCG ACTATCGCCG ACAGTTCGGC
GGCTCGTACT GGGGCGTGCA CCGCGCGGAC TTGCAGGCGA TCCTGTCGAA GGCGGTCGGG
GTCGAGCAGA TTCATCTCGG CCATCGGCTG GTCGAACTCG CGCAGGATCC GGAGCGCGTC
ACGCTGACCT TCGAGAACGG CGAGCGCGTC GACGCCGATC TCGTGATCGG CGCGGACGGC
GCGCGTTCGC TCACGCGGCG CTGGATGCTC GGCTACGACG ACGTGCTGTA TTCGGGTTGC
TCGGGCTTTC GCGGCGTGGT GCCGGCCGAG CGGATGAACC TGCTGCCCGA TCCCGAGACC
ATTCAGTTCT GGGTCGGGCC GCACGGGCAT CTGCTGCACT ATCCGATCGG CGACAACGGT
GACCAGAACT TCCTGCTGGT CGAGCGTCAT CCGTCGCCGT GGCCGTCACG CGACTGGGTC
ATGCCGGCGC AGGAGGGCGA GCAGCTGCGC CTGTTCGGGG ACTGGCATCC GGCGGTGGTG
CAGATGATCA CGGCGGTGCC GATCAGCCAG CGCTGGGGGC TGTTCCACCG GCCGCCGCTC
GGCCGCTGGA GCCGCGGGCG CGTGACGCTG ATCGGTGATG CCGCGCATGC GCTCGTGCCG
CATCACGGGC AGGGCGCGAA TCAGTCGATC GAGGATGCGA TGGTGCTGGC CGCGCAACTG
GCGAAGGCCG GGCCCGGCAA CTGGCGCGAG GCGCAGGGAG CGTACGAGCG GCTGCGGCGC
GGCCGCACGC GCAAGGTGCA GTACGCGTCG ATCTCCGCGG CCGACGTGCT GCATCTGCCC
GACGGGCCGG CCGCGCAGGC GCGCAATGCG CGCCTCGGCG AGCGCGACAG CGTGCTGCAT
CACCTGGACT GGATTCACGA TTTCGACGCG CTCGCCGATG AACCGGATGA GCGGCAGGGT
GGGACGTGGC TTTGA
 
Protein sequence
MQTNLRIAIV GAGIGGLTLA LALREQGIDA QLYEQTDVLR EVGAAVALSA NATRFYERMG 
LRPAFDAVCA EIPGLVYRDG RSGAVIGHHR GEPDYRRQFG GSYWGVHRAD LQAILSKAVG
VEQIHLGHRL VELAQDPERV TLTFENGERV DADLVIGADG ARSLTRRWML GYDDVLYSGC
SGFRGVVPAE RMNLLPDPET IQFWVGPHGH LLHYPIGDNG DQNFLLVERH PSPWPSRDWV
MPAQEGEQLR LFGDWHPAVV QMITAVPISQ RWGLFHRPPL GRWSRGRVTL IGDAAHALVP
HHGQGANQSI EDAMVLAAQL AKAGPGNWRE AQGAYERLRR GRTRKVQYAS ISAADVLHLP
DGPAAQARNA RLGERDSVLH HLDWIHDFDA LADEPDERQG GTWL