| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4010 |
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| Symbol | |
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| ID | 4312905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 924987 |
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| End bp | 926546 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638151851 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_775897 |
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| Protein GI | 115358759 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0954108 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTCTT CCTCACCGCC CGGCCCGCTG ACGGGCGCCC GCCTCGCGAT CGGCACGATC
GCGGTTTCGC TCGCGATGTT CATGAACGTG CTCGACTCGT CGATCGCGAA CGTCGCGATC
CCGACGATCT CGGGCGAGCT CGGCGTGTCG GTCGACGAAG GCACGTGGGT GATCACGATC
TTCGCGGCCG CCAACGCCGT GTCGATTCCA TTGACGGGCT GGCTCACGCA GCGCTTCGGC
CAGGTGCGCC TGTTCGTCAC GTCGATCCTG CTGTTCGTGT TCGCGTCGTG GCTGTGCGGG
ATCGCGCCGA ACCTGCCGAC GCTGCTCGCC GCGCGCATCC TGCAGGGTGC AGTGGCCGGG
CCGCTCGCGC CGCTGTCGCA GGCGCTGCTG CTCGGCGCAT GGCCGCGGCA GAAATCGGCG
ACGGCGCTCG CGCTGTGGTC GATGACCGCG CTCGTCGGCC CGATCGCGGG GCCGTCGCTC
GGCGGCTGGA TCACCTACGA CTACAACTGG TCGTGGATCT TCTACATCAA TATTCCGGTC
GGTTTCTTCG CGGCGGCGGT CACGTGGTTC GTGTTCCGCG ATCGCGAATC GCCGGTGCGC
CGCCTGCCGA TCGACACGGT CGGTCTCCTG CTGCTCGTGC TGTGGGTTGC GTCGCTGCAG
ATCATGCTCG ACAAGGGCAA GGATCTCGAC TGGTTCAATT CGCCCGTCAT CGTCGCGCTC
GGCATCGTCG CGCTGGTCGG CTTCGCGTTC TTTCTCGTGT GGGAGCTGAC CGAAGCCAAT
CCGATCGTCG ACCTGCGGCT CTTCACGCAG CGCAATTTCG CGGGCGGCAC GATCGCGATC
TCGGTCGCGT ACGGGATGTT CTTCGGCACG CTGGTGCTGC TGCCGCAGTG GATGCAGGGC
TATCTCGGCT ATCGCGCGAT CGACTCCGGG CTCGCCACCG CGCCGCTCGG GATCTTCGCG
ATCCTGCTGA CGCCGGTGAT GGGACGCATC CTGCCGCGCA CCGATCCGCG CTACCTCGCG
ACGTTCGCGT TCGTCGGTTT CGCGGTCGTG TTCATGATGC GCACGACGTT CTATTCCGAC
GTGTCGCACT GGGATCTCGT GCTGCCGACG CTGCTGCAGG GCATTCCGAT GGCGATGTTC
TTCGTGCCGC TCACCGCGAT CATCCTGTCG GGGCTGCCGC CGGAGAAGAT TCCCGCGGCC
GCCGGCCTGT CGAATTTCGG CCGCACGTTC TGCGGCGCGG TCGGCACGTC GTTGATCAGC
AATGCGTGGA ACGACCGGAC GATCCTGCAT CACGTGCGGC TCACCGAACA GGCGAGCCCG
GGCAACCCGA TCTTCGCGCA GCAGCTCGAC AGCGCGCGTT CGCTGCTGCA CCTGAGCCCC
GATTCGGCGC TCGCGTTCTT CAATACGTCG GTCGATTCGC AGGCGGCCGT GATGGGGCTG
AACGACATCT TCTACGTGTC GGCGATCATC TTCATCGCGA TCATTCCGCT GATCTGGATC
ACCCGGCCGT CGCGCTCGGG CGGCGACGAC GCGGGCGCGG CGGCAGCGGG CGCGCATTGA
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| Protein sequence | MSSSSPPGPL TGARLAIGTI AVSLAMFMNV LDSSIANVAI PTISGELGVS VDEGTWVITI
FAAANAVSIP LTGWLTQRFG QVRLFVTSIL LFVFASWLCG IAPNLPTLLA ARILQGAVAG
PLAPLSQALL LGAWPRQKSA TALALWSMTA LVGPIAGPSL GGWITYDYNW SWIFYINIPV
GFFAAAVTWF VFRDRESPVR RLPIDTVGLL LLVLWVASLQ IMLDKGKDLD WFNSPVIVAL
GIVALVGFAF FLVWELTEAN PIVDLRLFTQ RNFAGGTIAI SVAYGMFFGT LVLLPQWMQG
YLGYRAIDSG LATAPLGIFA ILLTPVMGRI LPRTDPRYLA TFAFVGFAVV FMMRTTFYSD
VSHWDLVLPT LLQGIPMAMF FVPLTAIILS GLPPEKIPAA AGLSNFGRTF CGAVGTSLIS
NAWNDRTILH HVRLTEQASP GNPIFAQQLD SARSLLHLSP DSALAFFNTS VDSQAAVMGL
NDIFYVSAII FIAIIPLIWI TRPSRSGGDD AGAAAAGAH
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