| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4007 |
|---|
| Symbol | |
|---|
| ID | 4312902 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | + |
|---|
| Start bp | 920523 |
|---|
| End bp | 921443 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638151848 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_775894 |
|---|
| Protein GI | 115358756 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3781] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGTTC GGCCGCGCGA GCACTGGCTG CGGATGCTGC TCGTCTGGAA CGGATCGGTG
CTGCCGACCA TCCTGCCGCA ACTCGTGCTG ACGCTCGCGA TCAGCCTCGT CGCGGTGTGG
GGCGGCGGCC GCGTGCTCGG CGAGAAGGTG CCGCTGAACC CGACGCCGTT CACGCTGATC
GGCCTCACGC TCGCGATCTT CGCGGGGTTT CGCAACAACG CGAGCTACGA GCGCTACCGC
GAGGGGCGGC AGCTGTGGGG CGGCGTGCTG ACCGCCACGC GCACGCTGGT GTCGCAAGCA
CTCTGCTACG GCGGGATCGA CGCCGACGAC GGCGCGCGGC AGGCGTTCGT GCGCAAGGTC
ATCGCGTTCG TCCATGCGCT GAAGCATCAG CTGCGCGGCA CCGATCCGGC GGCGGACCTG
CGTGCGCTGC TCGATGACGG GACCCATGCG CGCATCGTCG CCGCCCGGTA TGCGCCGATC
GCGATCGTTC ATGAACTGCG CGAGGCATTC GCCGCGCGCG CCGACGCCGG GCATCTCGCC
GATACACGGC TCTGGATGCT CGACGCACGC CTCGACGATC TCGTGTCGAT GGTGAGCGGC
TGCGAGCGCA TCGCATCGAC GCCGATCCCG TTCTCGTACG ACGTACTGCT GCATCGGACC
ATCTACGCAT ACTGCGTGCT GCTGCCGTTC GGCCTGGTTG ACTCGATCGG CGCGGCGACG
CCGTTCGTCA CCGTGTTCGT CGCCTATACG CTGATCGCGC TCGACGCGAT CGCCCATGCG
ATCGCCGAGC CGTTCGGCGA CGGGCCGAAC CAGCTCGCGC TCGATGCGAT GACGCGGATG
ATCGAGCGCA CGCTGCTCGA ACTGAACCGC GAGCCGCTGC CGGCGGAAGT GACGCCCGGC
CCGGCGTATC GGCTCACCTG A
|
|---|
| Protein sequence | MIVRPREHWL RMLLVWNGSV LPTILPQLVL TLAISLVAVW GGGRVLGEKV PLNPTPFTLI
GLTLAIFAGF RNNASYERYR EGRQLWGGVL TATRTLVSQA LCYGGIDADD GARQAFVRKV
IAFVHALKHQ LRGTDPAADL RALLDDGTHA RIVAARYAPI AIVHELREAF AARADAGHLA
DTRLWMLDAR LDDLVSMVSG CERIASTPIP FSYDVLLHRT IYAYCVLLPF GLVDSIGAAT
PFVTVFVAYT LIALDAIAHA IAEPFGDGPN QLALDAMTRM IERTLLELNR EPLPAEVTPG
PAYRLT
|
|---|
| |