| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4005 |
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| Symbol | |
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| ID | 4312900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 916611 |
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| End bp | 918032 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638151846 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_775892 |
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| Protein GI | 115358754 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.723654 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGCGTT ACGAACAACT GGCCGACGAG CTGCAGGCGC AGATCGAGCG CGGCGTATAC
CGGCCGGGCG AGCGGATTCC GTCGGTGCGG CAGGCGAGCC GGCAGCAGCA GCTCAGCGTG
ACGACCGTGC TGCGCGCGTA TCTCGTGCTG GAGAGCCGCG GCCTGATCGA GAGCCGGCCG
CAGTCCGGTT ATTTCGTGCG GGCGCGGGTC ACCGAGCCGG TCGAGGCCGA GCTGCACACG
TCGGCGCCGG CGGCCGAGCC GTCGGCGGTG GACGTCAGCC GGCTCGTGCT GTCGACGCTG
CGCTCGATCG CGCGTGACGA TGCGGTGCCG CTCGGCTCGC CGTATCCCGA CGCGTCGCAG
TTCCCGGTGC AGCGTCTTGC GCGCTACGCG CAGGCGATCG GGCGGCGGCG CACGCGCTGG
GGCGTGATCG ACGACCTGCC GCCCGGCAAC CAGGAACTGA TCCGCCAGAT CGCGCGGCGC
TACGCGGAGC GCGGGATCGC GGTCGAGCCC GGCGAGATCG TGATGACGAT CGGCGCGACC
GAGGCGATCA ACCTGTGCCT GCAGGCCGTC GCGCGGCCGG GCGATACGAT CGCCGTCGAG
TCGCCGACGT TCTACGCGAT GCTGCACGCG ATCGAGCGGA TGGGCATGCG CGCGCTCGAG
GTGGCGACGC ATCCGGGCGA CGGCATCGAT CTCGACGCGC TCGAACGAAT CCTCGCGCGC
GAGCGCATCG CCGCGTGCAT GGTGATGCCG AATTTCCAGA ATCCGCTCGG CTTCCAGATG
CCCGATGCGC GCAAGCGTGC GCTCGTCGAG CTGCTCGCGA AGCACGGCGT GCCGGCGATC
GAGAACGACG TCTACCACGA GCTGCATTTC GGCGACACGA CGCCGAGCGC GCTGAAGTCG
TACGACCGCG ACGGGCTCGT GCTGCATTGC GCGTCGTTCA CGAAGAGCCT GTCGCCGCGC
TACCGGATCG GCTGGGCGAT GCCGGGCCGC TATCGCGACC AGGTCGAGAA GCTGAAATTC
CTGAACACGC TCGCGACGCC CGCGATCGAG CAGCTCGCGA TCGCCGAATA CCTGAAGCAC
GACGGCTACG ATTTCCACCT GCGGCGGATG CGCAAGCAGT ATGCGCAGCA GGCGAGCCTG
ATGAGCGCGA TGGTGCGGCG TTTCTTCCCG GCGGGCACGC GGCTGTCGCA GCCGCAGGGC
GGGTACGTGC TGTGGGTCGA GTTGCCGCCG CGGGTCGACG CGATGAAGCT GTATGCGCTC
GCGCTCGCGC AGGGCATCAC GATCGGGCCC GGCCACATGT TCTCGGCGAG CGCCGATTAC
CGGCATTTCA TCCGGCTCAA CTACAGCTAT CCGTGGTCGC GGCAGATCGA GGACGCGTTG
AAGGTGGTCG GGCGGCTCGC GTCCGAGTGC GCGGGGCGGT GA
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| Protein sequence | MKRYEQLADE LQAQIERGVY RPGERIPSVR QASRQQQLSV TTVLRAYLVL ESRGLIESRP
QSGYFVRARV TEPVEAELHT SAPAAEPSAV DVSRLVLSTL RSIARDDAVP LGSPYPDASQ
FPVQRLARYA QAIGRRRTRW GVIDDLPPGN QELIRQIARR YAERGIAVEP GEIVMTIGAT
EAINLCLQAV ARPGDTIAVE SPTFYAMLHA IERMGMRALE VATHPGDGID LDALERILAR
ERIAACMVMP NFQNPLGFQM PDARKRALVE LLAKHGVPAI ENDVYHELHF GDTTPSALKS
YDRDGLVLHC ASFTKSLSPR YRIGWAMPGR YRDQVEKLKF LNTLATPAIE QLAIAEYLKH
DGYDFHLRRM RKQYAQQASL MSAMVRRFFP AGTRLSQPQG GYVLWVELPP RVDAMKLYAL
ALAQGITIGP GHMFSASADY RHFIRLNYSY PWSRQIEDAL KVVGRLASEC AGR
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