Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_3983 |
Symbol | |
ID | 4312879 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 891994 |
End bp | 893241 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638151825 |
Product | major facilitator transporter |
Protein accession | YP_775871 |
Protein GI | 115358733 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.134584 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCCT CGCTCACTCC GGCGCGCGAA TCGAACTCGC CGCGCTTCCT GTTGTTTCTG ATTTGCCTGT TCTCGTCCGC CGGCCAGCTC GCGATCGACA TCTACGTGCC CGCGCTGCCC GACATGGCGC GCTCGTTCGC GACCACGCCG CAGGCGATCC AGTCGAGCGT GTCCGGCTAC ATGGCCGCCT ATGCGCTCGG CCAGTTGATC TTCGGCCCGG TGGCCGACGC GTACGGACGC AAGCGCGTGC TCGCGTTCGG GCTCGTCATC TATACGATCG GCTGCCTGCT GTCGCTCGGC GCGCCGAACC TGGAGACGTT CATACTGGCG CGCTGCCTGC AGGGCTTCGG GATCGCGACC ACGAACCTGC TTGCGAAGGC GATCATCACC GACTCGTTCT CGGGCCAGGC GCTGATGCAT GCGTTCACGT ACATGTCGAT CGCATGGGGG CTCGCGCCGA TCATCGCGCC GGTGATCGGC GCGCACCTGC AGGAATGGTT CGGCTGGCGC GCATGCCTCG TGTTCCTGCT GGTGTATTCG CTGGTGATGT GGGCGCTGTG GTGGCATTAC CGGGAAACCT TGCCGAAACC GGTCCATCTC GAGCCGCGTA CGCTGATCGC GAACGCGGGC AAGGTGCTCG CGAGCCCGGT GTTCCAGAGC TGCTTCCTCG CGCAGGGGCT GTGCTACAGC ATCCTGCTGG TGTTCAACAT CGTCGGGCCG TTCATGGTGC AGACCACGCT GCACAAGCCA CCGACCTTCT TCGGTTATCT CGCGCTCGGG ATCGGGCTGA TGTATTTCCT CGGCGGGCTG TCGAACCGGA TTCACGGGCG CGGGCTGCCG AGCGCCGAGC AGCGGCTGCG CATCGGCGCG CGCGTGATGG CGGTCGCGGC GGTCGTGATG CTCGCGCTGG CGCTGACCGT CGGCCTGCGC GTGTGGACGC TCGCGACGCC GGTGCTCGTG ATGGGCCTCT GCGCGGGCGC GATGTATCCG ACGCTGATGG CGAAGGGCAA TTCGCTGTTT CCGCATATCG CGGGGCTGAC GAGCGCGATT CTCGGGTGCG CGCTGCTGCT CGTGTCGTCC GCGATGATGG GGCTGGCTGG CTTCGTGTCG GTGCAGGTGC TGACGCCGCT CGCGGTGTTC TTCGTCGCGC TGTCGTTCAT CGTCGTGTGG ATGGTGACGA AGCTGCTGCG CTACCTGAGC CAGCAGCAGG CCGCGAGCGT CGCTTGCGGG AGCGGGGAGG CGGCGTAA
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Protein sequence | MNASLTPARE SNSPRFLLFL ICLFSSAGQL AIDIYVPALP DMARSFATTP QAIQSSVSGY MAAYALGQLI FGPVADAYGR KRVLAFGLVI YTIGCLLSLG APNLETFILA RCLQGFGIAT TNLLAKAIIT DSFSGQALMH AFTYMSIAWG LAPIIAPVIG AHLQEWFGWR ACLVFLLVYS LVMWALWWHY RETLPKPVHL EPRTLIANAG KVLASPVFQS CFLAQGLCYS ILLVFNIVGP FMVQTTLHKP PTFFGYLALG IGLMYFLGGL SNRIHGRGLP SAEQRLRIGA RVMAVAAVVM LALALTVGLR VWTLATPVLV MGLCAGAMYP TLMAKGNSLF PHIAGLTSAI LGCALLLVSS AMMGLAGFVS VQVLTPLAVF FVALSFIVVW MVTKLLRYLS QQQAASVACG SGEAA
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