Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_3976 |
Symbol | |
ID | 4312872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 878477 |
End bp | 879001 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638151818 |
Product | DoxX family protein |
Protein accession | YP_775864 |
Protein GI | 115358726 |
COG category | [S] Function unknown |
COG ID | [COG2259] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.603426 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00896237 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCCGGTTG TTGCAGAGCG GGGCGGGCGG CACTGGCGGC CGCCTGTCCT GGTTCGTTGG CAATCCGGTG CGCGCGGTTC GCGCATCGTT TTCGTTGATC ACACCATGAC ACCGAATCAA CCGTTTCTCG CGTCCCAGCG CGATGTGCTG CTGCTGCTGT CCCGAATCCT GCTCGTGATC CTGTTCGTGA TGTTCGGCTG GAAGAAGATC GTCGACTTCT CCGGTACGAT CGCGTTCATG GGAAGCGAGG GCGCGCCCGC GCCGATCATC TCGGCGGCGA TCGCCGTCGT GATGGAGCTG TTCGTCGGCA TCGCGCTCCT CATCGGCTTC CAGACGCGGC CGCTTGCGCT GCTGCTTGCG CTGTATACCA TCGGCACCGC GCTCATCGGC CACCACTACT GGACGATGAC GGGCGGCGAG CAGATGAACA ACATGATTCA TTTCTACAAG AACATCGCGA TCTCCGGCGG CTTGCTTGCG CTGTGCGCGG CGGGCCCCGG ACGTTTTTCG ATCGATCGCG GGTGA
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Protein sequence | MPVVAERGGR HWRPPVLVRW QSGARGSRIV FVDHTMTPNQ PFLASQRDVL LLLSRILLVI LFVMFGWKKI VDFSGTIAFM GSEGAPAPII SAAIAVVMEL FVGIALLIGF QTRPLALLLA LYTIGTALIG HHYWTMTGGE QMNNMIHFYK NIAISGGLLA LCAAGPGRFS IDRG
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