| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3970 |
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| Symbol | |
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| ID | 4312866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 868551 |
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| End bp | 869453 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638151812 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_775858 |
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| Protein GI | 115358720 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0489002 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATACC ATCAGCTGAA AGCGTTCGTC ACCGTCGCGG AAGAAGGGAG CATCCGCGCG
GCCGCGCGGC GTCTGAACGT GTCGCCGGCG GCGCTGACGA AGGCGGTCAA GGAGCTGGAG
ATCGCGCTTG GCGTATCGCT CGTGGTGCGC ACCGCGCGTG GCGTGCAGCT CACCGCGTTC
GGCCAGCAAT TGCAGGTGCG CGCGCGGTTG ATCGTCGCCG AAATGCAGCG CGCGCGCGAC
GACATCGAGC AGGCGCAGGG CGCGATGACC GGCTCCGTCG CGGCGGCGAT CACGCCGGCG
GCGGCGGTGA CGATCCTGCC CGATGCGTTT CGCGCGTTCC GGCGGCGCTT TCCGGTCGCG
CGCGTCAATC TCATCGAAGG GTTTCCGGGC GTCGCGCTGC CGCGGCTGCA CGACGGCTCG
CTCGATTTCG CGGTGGCCGT CGTCGTGCCC GAATTGCTCG CTGCCGAGTT CGATCACGCG
GAGCTCTATG CGAGCCGATC GCTGATCGTC GCGCGCAAGG GCCATCCGCT CGCGTCGGCC
ACGTCGCTCG CCGATCTCGT CGACGCCGAC TGGCTGATGA ATCCTTCTCC CGAAAGCTCG
ACCCAGGTGC TGTTCAACTC GTTCGTCGCG TATGGGCTGC CGGTGCCGCA GCGGGTCGTC
GAATGCCCGA GCTTCGGGCT CGCGCACAGC CTGATGACGC GCTGCGACCT GATCGCGTCG
ATGCCCGAGC AACTGCTGCA CGGCGAGTGG GCGCGCGACC AGCTCGCGGT GCTGCCGATC
CGCGAGCGGC TGCCTGGTGT GTCCGTGCAG GTCGTCACGC GCCGCGACAG CCCGCTCACG
CCGGCCGCGG CGATGCTGCT CGACTGCCTG CGCGATTCCG CGCGACGCAA AGGGCTCGGA
TGA
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| Protein sequence | MKYHQLKAFV TVAEEGSIRA AARRLNVSPA ALTKAVKELE IALGVSLVVR TARGVQLTAF
GQQLQVRARL IVAEMQRARD DIEQAQGAMT GSVAAAITPA AAVTILPDAF RAFRRRFPVA
RVNLIEGFPG VALPRLHDGS LDFAVAVVVP ELLAAEFDHA ELYASRSLIV ARKGHPLASA
TSLADLVDAD WLMNPSPESS TQVLFNSFVA YGLPVPQRVV ECPSFGLAHS LMTRCDLIAS
MPEQLLHGEW ARDQLAVLPI RERLPGVSVQ VVTRRDSPLT PAAAMLLDCL RDSARRKGLG
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