Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_3964 |
Symbol | |
ID | 4312860 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 862271 |
End bp | 863239 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638151806 |
Product | LysR family transcriptional regulator |
Protein accession | YP_775852 |
Protein GI | 115358714 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0669221 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.168256 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACATGC TCGAAAACAT GCGCCTGTTC GTGCGCGTTG TCGAAGCCGG CAGTTTCACC GCGGTCGCGA AAGAAATCGA CGCGACCACC GCGCAGGTGT CGCGCGCGGT TTCGAATCTC GAAGCCCACG TACAGACGCG CCTGCTGCAT CGCACGACGC GCCATCTCGG CCTGACCGAA AGCGGCGAGC GCTATTTCGA GCGGGCGAAA TCGATCCTCG CCGAAATCGA CTACGCGAAC GCCGAAGCGC GCAACGCGCT GCTGCGGCCG AGCGGCAAGA TGCGCATCCA TGCGATGACG GGGCTCGGGC AGAGTCATGT CGTGTCGTCG ATCGTGCGCT ATCAGGAAGA CAACCCGGAC GTGTCGGTCG AGCTGACGCT CGCGCAGCGG ATGCCGAACC TCGTCGAGGA GGGCTACGAC GTGTCGATCG TGACCGCGTC GCAGTTGCCC GATTCCGGCT ACGTCGCGCA GACCTGCGGC ACGAGTTGCA GCGTGCTGGT TGCATCGCGC GACTACCTCG CGCGGCACGG CACGCCGACG ACGCCGGACG ACCTGCCGAA CCACGTGTGC CTGCGCCTCG ATACGCCCGC GTCGCCGGCC AGCGAGTGGC GGCTCGAGCG CGGCGACGAC GAGGAGACCG TCTACGAACT GCAGCCGGCG CCGTTCCAGG TCAACGTGCC GGATGCACTG TGCGTCGCGG TGCGGGCGGG GCGCGGCATC GCGTGCGTCG CGCTGTACAC GGTGCTCGAC GACCTTCGCG AAGGGCGGCT GATCCGCGTG CTGCCCGACT ATCGGCTGCA GACGGTCAGC GTGTACGCCG TCTATGCGAC GCGCCGCTAT CTGGACGCGA AGATCCGCAC CTTCCTCGAC CATCTGCGCA CGACGCTTAC GCCCGCGCTG GAAAACGACC TGCGCGAACT CGACCGTCTC ACGGTCGAGC ACACGCCGGG CAAGCGTCAG CGCGCGTGA
|
Protein sequence | MDMLENMRLF VRVVEAGSFT AVAKEIDATT AQVSRAVSNL EAHVQTRLLH RTTRHLGLTE SGERYFERAK SILAEIDYAN AEARNALLRP SGKMRIHAMT GLGQSHVVSS IVRYQEDNPD VSVELTLAQR MPNLVEEGYD VSIVTASQLP DSGYVAQTCG TSCSVLVASR DYLARHGTPT TPDDLPNHVC LRLDTPASPA SEWRLERGDD EETVYELQPA PFQVNVPDAL CVAVRAGRGI ACVALYTVLD DLREGRLIRV LPDYRLQTVS VYAVYATRRY LDAKIRTFLD HLRTTLTPAL ENDLRELDRL TVEHTPGKRQ RA
|
| |