| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3961 |
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| Symbol | |
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| ID | 4312857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 859738 |
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| End bp | 860826 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638151803 |
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| Product | sodium/calcium exchanger membrane region |
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| Protein accession | YP_775849 |
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| Protein GI | 115358711 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0387] Ca2+/H+ antiporter |
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| TIGRFAM ID | [TIGR00378] calcium/proton exchanger (cax)
[TIGR00846] calcium/proton exchanger
[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0830114 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.184483 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGATCT CGTCCAACCA GCTCCCGCGC TGGACCCTCT GGGCCCCGCT TGCCGCGTGG
CTGGTACTCG CGCTGTCGCG CGTCGTGCCG GCCGAAGGCC TCGTCATCGC AGTGTTGGCC
GCCGCGCTCG CCGGCGCCGT GTTCGCCGCC GTCCACCATG CCGAAGTCGT CGCGCACCGC
GTCGGCGAGC CGTTCGGCAC GCTCGTGCTC GCGGTCGCCG TAACCGTCAT CGAAGTCGCG
CTGATCGTGT CGGTGATGCT CGGCGCCGGT CCCGAGAAAT CGGGCCTCGC GCGTGACACC
GTGTTCGCCG CCGTGATGAT CATCTGCAAC GGCATCGTCG GCCTCTGCCT GCTGGTCGGT
GCATGGAAGC ACGGCGAGCA GGACTTCCAG GGGCGCGGGG CGAGCAAGGC GCTTGCGGTG
CTCGCGTCGC TGTCGGTGCT GTCGCTCGTG ATGCCGAACT ACCTGAGCGC CGCGCCCGGT
CCGTTCTTTT CGAAATCGCA GCTGGCGTTC GCCGGCGTGT CGTCGCTCGT ACTGTACGGC
GCATTCGTAT TCGTGCAGAC CGTGCGTCAC CGCGACTACT TCCTCACCGC GCACGACAGT
GCGAATGAAT CGGTGCACGC GGCACCGCCG ACCGGCCGCA CCGCGGCGAT CAGCCTCGTG
CTGCTGTTCG CGAGCCTCGT CGCGGTCGTG CTGCTCGCTA AGCTGTTGTC GCCGGCCGTC
GAACATGCGG TGATGAAGCT CGGCGCACCC GAAGCGGCCG TCGGCATCGT GATCGCCGCA
CTCGTGCTGC TACCGGAAGG GCTCGCGGCC GTCACCGCCG CGCGCGCGAA CCGCCTGCAG
ACCAGCATGA ATCTCGCGCT CGGTTCGGCG CTCGCGAGCA TCGGGCTCAC GATCCCGACC
GTCGCGGCCG TGTTCATCTG GGTCGGCCAG CCGCTCACGC TCGGCATCGG CGCGATGGAA
ACCGTGCTGC TGGCGCTCAC GCTGCTCGTC AGCACGCTGA CGCTTAGCCA GGGGCGCACG
ACGGTGCTGC ACGGCGTCGT GCACCTGTCG CTGTTCGCGG CGTATCTGTT CCTGTCGATC
ACTCACTGA
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| Protein sequence | MPISSNQLPR WTLWAPLAAW LVLALSRVVP AEGLVIAVLA AALAGAVFAA VHHAEVVAHR
VGEPFGTLVL AVAVTVIEVA LIVSVMLGAG PEKSGLARDT VFAAVMIICN GIVGLCLLVG
AWKHGEQDFQ GRGASKALAV LASLSVLSLV MPNYLSAAPG PFFSKSQLAF AGVSSLVLYG
AFVFVQTVRH RDYFLTAHDS ANESVHAAPP TGRTAAISLV LLFASLVAVV LLAKLLSPAV
EHAVMKLGAP EAAVGIVIAA LVLLPEGLAA VTAARANRLQ TSMNLALGSA LASIGLTIPT
VAAVFIWVGQ PLTLGIGAME TVLLALTLLV STLTLSQGRT TVLHGVVHLS LFAAYLFLSI
TH
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