| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3927 |
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| Symbol | |
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| ID | 4312823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 815948 |
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| End bp | 817381 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638151769 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_775815 |
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| Protein GI | 115358677 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.510298 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCT ACGAAACCCT CGCCCACACG ATCGCCGACG AAATCCGCAA CGGTAACCTC
GCGGTCGGCA CGCGCCTGCC GTCGCTGCGG CAGATCATCG CGCAACATGG CGTGAGCCAG
TCGACGGTGT TTCGCGCGTA CTACCTGCTC GAACAGTGGG GGTTGATCCG CGCGCGCGAG
CGCTCCGGTT ATTACGTCGC GCCGGGCGCG AGCCCCGCGG CGAACGCGCC CGCGAAACGC
CGCGCGAGCC GCGCCGGCGC GACGCGCAAG GTCGACATCA GCGATCTCGT GTTCTCCGTG
CTCGACGCCG CGACGCAGCC CGGCATCGTG CCGCTCGGCT CCGCATTCCC GTCGCCGCAA
CTGTTTCCGC TGCAGCGCCT CGCGAAGTCG CTCGCGCAGG CGACGCGGCT CGTCAGCCCG
TGGAGCACGG TCGTCGACCT GCCGCCCGGC AACGAGGCGC TGCGCCAGCA GATCGCGCGA
CGCTATCTGG CGACCGGCAT CGCGCAGCCC GTCGACGAGA TCGTCGTCAC GAACGGCGCG
CTGGAAGCGC TGAACCTGTG CCTGATGGCT GTCACGCGGC CGGGCGATAT CGTCGCGGTC
GAGTCCCCCG GCTTCTATGC GGCGCTGCAG GCGATCGAGC GGCTCGACCT GCGTGCGGTC
GAGATTCCCG TCGATCCTCG CACGGGCCTC GATCTCGACG CGCTCGAGAA CGCGCTGGAG
CGACACGACA TCCGCGCGTG CTGGTTCATG ACCAATTTCC AGAATCCGAC CGGCGTCACG
CTGTCGGCCG ACAAGAAACG CGCGCTCGTG GAGATGCTGG CCGCGCGCGA GGTGCCGCTG
ATCGAGGACG ACGTGTACGG CGAGCTGCAT TTTGGCGCCG ACTACCCGCT ACCCGCGCGC
GCCTACGACC GCAACGGCCT CGTGATGCAT TGCAGTTCGT TCTCGAAGAC GCTCGCGCCC
GGCTACCGGA TCGGCTGGGC CGCGGCCGGC CGTTTCGCGG AAAAGGTGCA GCGGCTCAAG
CTGATGACCA CGCTGTCGGC GAGCATTCCC GCGCAGGCCG GCATCGCGAA CTACCTGGAG
CATGGCGGCT ACGATCGTCA CCTGCGCAAG CTGCGCGGTG CGCTGCAGAC GCAGCTCGCC
CGCATGGACG ACGCACTGCG GCGCTGGCTG CCGCCCGGCG TGGAATGGGT GCGGCCGGAC
GGCGGATATT TTCTGTGGCT GTCGTTTCCC GAGGCGATCG ACGCGATGGA ACTGCATCGC
CAGGCGATCG CGCGCGGCAT CAGCTTCGCA CCCGGGCCGC TGTTCTCGGC CGCGCACGGC
TTCGAGCGCT GCGTGCGCGT GAACTTCGGC CATCCGTGGA GCCGCGACAT CGAACGCGCG
ATCCGCGTGC TCGGCGAGCT TGTCGCCGAA CCGGCGGTAC GCAAGGCCGG GTAA
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| Protein sequence | MKRYETLAHT IADEIRNGNL AVGTRLPSLR QIIAQHGVSQ STVFRAYYLL EQWGLIRARE
RSGYYVAPGA SPAANAPAKR RASRAGATRK VDISDLVFSV LDAATQPGIV PLGSAFPSPQ
LFPLQRLAKS LAQATRLVSP WSTVVDLPPG NEALRQQIAR RYLATGIAQP VDEIVVTNGA
LEALNLCLMA VTRPGDIVAV ESPGFYAALQ AIERLDLRAV EIPVDPRTGL DLDALENALE
RHDIRACWFM TNFQNPTGVT LSADKKRALV EMLAAREVPL IEDDVYGELH FGADYPLPAR
AYDRNGLVMH CSSFSKTLAP GYRIGWAAAG RFAEKVQRLK LMTTLSASIP AQAGIANYLE
HGGYDRHLRK LRGALQTQLA RMDDALRRWL PPGVEWVRPD GGYFLWLSFP EAIDAMELHR
QAIARGISFA PGPLFSAAHG FERCVRVNFG HPWSRDIERA IRVLGELVAE PAVRKAG
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