Gene Bamb_3897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3897 
Symbol 
ID4312793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp789935 
End bp790465 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content68% 
IMG OID638151739 
Productcarbonic anhydrase 
Protein accessionYP_775785 
Protein GI115358647 
COG category[R] General function prediction only 
COG ID[COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.731828 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTGT TCGAATTCAA CGGCACGCGC CCGCGCGTCG ATCCGTCCGC GTACGTTCAT 
CCGAGCGCGG TCGTGATTGG CGACGTGACG ATCGGCGCGC GCTGCTACAT CGGCCCGCAT
GCGAGCCTGC GCGGCGATTT CGGCGCGATC GTAGTCGACG AAGGCAGCAA CGTGCAGGAC
GGTTGCGTGC TGCACGTCGG CATCGGCGAG ACGTGCCGCC TCGGCATGAA CAGCCACATC
GGACACGGTG CGATCGTGCA CGGCGCGACG CTCGAACCGG ACACGATGAG CGGGATGAAC
GCGGTCGTGA TGGACGGAGC GACGATCGGC GCGACGACGA TCGTCGCCGC GTGCGCGTTC
GTGAAGGCCG GCTACGACGT GCCGCGCGGC GTGCTGCTCG CGGGCGTGCC GGGGCGCGTG
GTGCGGCGAC TGAACGACGC GGAGATCGCG GCGAAGGCGA ACGGCACGCG GGTCTATCAG
CAGCTTGCGG TGGATTGCCT GAAGACGCTC AGGCAGATCG ACGACGCGTA G
 
Protein sequence
MPLFEFNGTR PRVDPSAYVH PSAVVIGDVT IGARCYIGPH ASLRGDFGAI VVDEGSNVQD 
GCVLHVGIGE TCRLGMNSHI GHGAIVHGAT LEPDTMSGMN AVVMDGATIG ATTIVAACAF
VKAGYDVPRG VLLAGVPGRV VRRLNDAEIA AKANGTRVYQ QLAVDCLKTL RQIDDA