Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_3793 |
Symbol | |
ID | 4312689 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 661977 |
End bp | 663971 |
Gene Length | 1995 bp |
Protein Length | 664 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 638151635 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_775681 |
Protein GI | 115358543 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.191798 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGACCT TTACCCGTGA GCTGTTTCGG CAGGGCATAT GGGTCGTGCT GGCCGTCGGG GTGGCGGCCG TGCTGCAGGC GTGGGCGATT CACGTCATCG GCATGCACGA ACCGTTCGCG CCGCTGCCTT TCTACGCCGG TGTCGCGGCT GCGGCCTGGC TGACGTCGTT TGCCGGCGGC GTGGCCGCGA GCGCCTTGAG CCTCGCCGTG ATCGGCGCCT TGTGGTGGCG CAATGCGCCG CTGCCCGATC TCCTCTCGCA AGCCGGCGCT TTCGTCGCGA TCAGCTTCGT CGAGTGCGTG CTCGTGATGG CCGTCAAGCC GCTGCTCGCC AACGACCGGC TGCGCGGCGC CGAGGATGCG GAAGAGGACG GCGCGCGCTC GCCGCGCCGC GAACCCGAAC CTGGAACCCT GGCGCGCTCG GTCGACGACA CAGTGCTGCG CCGCGTGGTC GATGCATCGC CCGACGCGAT CGTCGGCGTC GATGTCGCAC GGCGCATCAC GAGCTGGAAC CTGGCCGCGC GGCGCCTCTT CGGCATCGAC GCGGCGGCGG CGATCGGGCA CGACGTCACG ATGCTGATCG CGCCGCGCTG GTTGCGATTA CATCCGGTGC CCGCATCGTT CGCGGACGCG GGCGCGCCGG CCGGCCCGCT CGACATCCTG TGCCTGCGCC GCGACGGCAG CCGCTTTCGC GCGACCTTCA CGGCGTCGCC GATCGTCGAC GCGCAAGGCA ATTGCACCGG CTTGTCGATG ACGCTGCGCG AGGCGCGCGA ACGCCGCCGC TGCGAGCAGC GCGATCTGCG CATGTTGCGC GGCGCGCGCG ACGCGCGCGT GCAGGCCGAC GAGTCGAACC GGATGAAGGA CGAACTGCTG GCCACCGTGT CGCATGAACT GCGCACGCCG CTGAACGTGA TCTACGGCTG GGTCGAGGTG CTGCGCAGCG GCGAGGGGCA GGGCTTCGCG CATCAGGCGA TCGACGCGAT CGATCGCAGC GCGCGCTCGC TGTCGCGGAT GGTCGGCGAC CTGCTCGACG CGTCATCGCT CGCGACGGGC CGGGTGCGGC TCGAACGCAC GCCGGTCGAC CTCGTGCGGA TCGTGCAGGA GGCCGTGCGC GAAATCGGCG ACACCGCGCA GGCGAACGGC CTCGAGCTGT CGACCGAGTG CGCGATGCCC AGCTGCGTGA TCGCCGCGGA CGCCGAGCGT CTGCGCCAGT TGCTGTCGAA CCTGTTGTCG AATGCGATCA AGTTCACGCC GCCGGGCGGG CGCATCAAGG TGTCGTTGAA CCCGGCCGGC GCGCGCGTGC GGCTGTCGGT CGCCGATACG GGTCAAGGTA TTTCCGCGGA ACGCCTGCCG CACCTGTTCG ATACGTTCAG CCGGCCGGAA GGCGCGCCCG CGTTGCCGAA ACGCGGTTTA GGGCTCGGCT TGTCGATCGT GCGCAACATC GCGCGGCTGC ACGGCGGCGA GGTCGCGGCG GCGAGCGAAG GCGCCGGGCG CGGCACGACC GTGACCGTCA TGCTGCCGGC GGATCTGGGT GCCGACGATA CGACGACCGG CCATCCGGTA CGGCCGAGCG GGGCGTCGAC GGCGGTCGCG CTCGACGGCC GGCGCGTGCT GGTGGTCGAC GACGACGCGA CGTCGCGCGC CAGCCTCGCG GCCGCGCTGG AAACGCTGGG CGCCGAGGTG TCGACCGCGC AATCGGGACA CGACGCGCTC GACGTGGTGG CGCAGCAGCA CCCGAGCGTC GTGCTGTCCG ATCTCGCGAT GCCGGACGGC GACGGCTTCT GGCTGCTTGA CCACATTCGC GACTTGCCGG ACGGCGGCGG GCGCCTGCCC GTCGTCGCGG TGACCGCGCA TGCGGGCACG GCGGACCGCA GCCGCGTGAT GGCCGCCGGC TTCGACGCGT ATCTGTGCAA GCCGGTCGAC GTTCCGACGC TGGCCAGCGT GATCGTCGAC GTATCGCCCG CCGACGCGAC GGGTGGCACC GGGCGGCGCC ACTGA
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Protein sequence | MRTFTRELFR QGIWVVLAVG VAAVLQAWAI HVIGMHEPFA PLPFYAGVAA AAWLTSFAGG VAASALSLAV IGALWWRNAP LPDLLSQAGA FVAISFVECV LVMAVKPLLA NDRLRGAEDA EEDGARSPRR EPEPGTLARS VDDTVLRRVV DASPDAIVGV DVARRITSWN LAARRLFGID AAAAIGHDVT MLIAPRWLRL HPVPASFADA GAPAGPLDIL CLRRDGSRFR ATFTASPIVD AQGNCTGLSM TLREARERRR CEQRDLRMLR GARDARVQAD ESNRMKDELL ATVSHELRTP LNVIYGWVEV LRSGEGQGFA HQAIDAIDRS ARSLSRMVGD LLDASSLATG RVRLERTPVD LVRIVQEAVR EIGDTAQANG LELSTECAMP SCVIAADAER LRQLLSNLLS NAIKFTPPGG RIKVSLNPAG ARVRLSVADT GQGISAERLP HLFDTFSRPE GAPALPKRGL GLGLSIVRNI ARLHGGEVAA ASEGAGRGTT VTVMLPADLG ADDTTTGHPV RPSGASTAVA LDGRRVLVVD DDATSRASLA AALETLGAEV STAQSGHDAL DVVAQQHPSV VLSDLAMPDG DGFWLLDHIR DLPDGGGRLP VVAVTAHAGT ADRSRVMAAG FDAYLCKPVD VPTLASVIVD VSPADATGGT GRRH
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