| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3782 |
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| Symbol | |
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| ID | 4312678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 652105 |
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| End bp | 653865 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638151624 |
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| Product | polypeptide-transport-associated domain-containing protein |
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| Protein accession | YP_775670 |
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| Protein GI | 115358532 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2831] Hemolysin activation/secretion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.627469 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.463538 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATAA TTAAACGGCT GGTAGCGGTG CCGCTCACTG CTTTTGTATC GCTTGCGGCG
CAAGCGCAAC AAGCGCCCAC GCCTGCCGAC CAAGCCGCAG CAGCGCGCGC GAATGCTGAA
CAGGATCGGC AGGCGCAGCA GCAACGTGAC GCGCAGCAGC GTGATGCTAC CGTGCGCGCC
CCGTCCGTTC GTTCGGAAGT GCCGCAGGTC GAAATGTATC CCGTGATACC GAGCGAGCAG
CCGTGTTTCC GCATCGACCG TTTTGCGCTC GACGTCCCGG ATTCGCTGCC GGATTCCGCG
AAGGTGAAAG GAGCCTCCGC CTTGCCGATG GATCGCTTTG CATTCGCACG CGAATGGCTC
GCCCACTACG CCGGTCAGTG CGTCGGCAAG CAAGGCGTCG ATACGATCGT CAAGGGGCTG
TCTCGGGCGA TCCTGGCGCG CGGTTACATC ACAACGCGCG TCCTGCTACC AGAACAGGAT
TTGTCGACTG GCACGCTGAA AGTTGCACTG ATTCCCGGCG TGATCCGACA CGTGCGCTTC
GCCGACGAAA AATTGCGAGG AACATGGAAA ACCGCGTTCC CAACACGCGA CGGCGAAGTG
TTGAACCTGC GCGACCTTGA GCAAGGTCTA GAGCAGATGA AGCGCGTTAC GAGTCAGGAC
GTGTCGATGC AGATCGTTCC GGCTGACGTG CCGGGTGAAA GTGATGTCGT GCTCGACGTG
AAGCGCAGCA AGCCGTGGAC CGCCGTCGCA TCGATCGACA ACTCGGGCAC GCGCGCGACC
GGCAAGCTAC AGGGCAACCT GTCGATTGGC GTCGATAACC CGCTCGGGCT AAACGACATA
TTCAACATCG GCGTGAGCCA AGACCTCGAA CTCGGCGACA AGCGCCTTGG TTCGCACGGT
TGGAACGGTT TCTATTCGAT TCCATGGGGA TACTGGACCG CGACGTTATC GGCCTACACG
AACACGTACT ACCAGCAGAT CGCGGGCGTT AATCAGACAT TCGTGGCGAG CGGGAACTCC
AAGACGATTG ATTTCAAACT GGCACGCGTG CTTGCACGCA GTCAGAACGA CGTGTTGGGC
GGCTATTTCC GCTTGTCGCG CCGCTTCGGT CAGAGCTTCA TTGAAGATAC GGAAATCCCG
CAACAGCGGC GCAACAACAC GTTCGTAGAA ATCGGCCTGA CAGATCGCCA TTACTTCGAC
GGGGCGCAGT TCGACGGCAC GCTGGCTTAT CGTCAGGGTG TCGGCGGCTT GGGTGCTCAG
GACGACATTC TTGCTACCGG GGGCGGTCCG ACTTACCGCT TCAAGATGGC GGTGCTCGAT
GCGAACCTGT CGGTGCCGTT TGCCATTGCG GCGCAGCCGT TCCGATACGT TACGAGCATT
CACGGTCAAT ATACGGGGAA CTCGCTGTAC TACATCGACG ACTTGACGAT CGGCAGTCGC
TACACAGTTC GGGGATTCGA CGGTGAAACG ATGCTGGCGG CGGCACGTGG CCTCTACTGG
CGCAACGAGT TGCAGATGCC GATCGGCCAA ACAGGGCAGA TAGTGTACGC AGGCCTCGAC
TACGGCCGCG TATGGGGACC GCAACCGGTG GCGCTGGTCG GTACGCAGTT GGCCGGTGCA
GTGATTGGCG TTAAGGGCAG CGTCGCGACG CGCTTTGGTG GCTACGGTTA CGACTTGTTT
GCAGGTACGC CGGTCTACAA GCCGTCCGGA TTTCCGACGG CGCGCGTGAC AGTTGGATTT
CAGGTGACGG CGCAGTTTTG A
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| Protein sequence | MKIIKRLVAV PLTAFVSLAA QAQQAPTPAD QAAAARANAE QDRQAQQQRD AQQRDATVRA
PSVRSEVPQV EMYPVIPSEQ PCFRIDRFAL DVPDSLPDSA KVKGASALPM DRFAFAREWL
AHYAGQCVGK QGVDTIVKGL SRAILARGYI TTRVLLPEQD LSTGTLKVAL IPGVIRHVRF
ADEKLRGTWK TAFPTRDGEV LNLRDLEQGL EQMKRVTSQD VSMQIVPADV PGESDVVLDV
KRSKPWTAVA SIDNSGTRAT GKLQGNLSIG VDNPLGLNDI FNIGVSQDLE LGDKRLGSHG
WNGFYSIPWG YWTATLSAYT NTYYQQIAGV NQTFVASGNS KTIDFKLARV LARSQNDVLG
GYFRLSRRFG QSFIEDTEIP QQRRNNTFVE IGLTDRHYFD GAQFDGTLAY RQGVGGLGAQ
DDILATGGGP TYRFKMAVLD ANLSVPFAIA AQPFRYVTSI HGQYTGNSLY YIDDLTIGSR
YTVRGFDGET MLAAARGLYW RNELQMPIGQ TGQIVYAGLD YGRVWGPQPV ALVGTQLAGA
VIGVKGSVAT RFGGYGYDLF AGTPVYKPSG FPTARVTVGF QVTAQF
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