Gene Bamb_3759 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3759 
Symbol 
ID4312655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp621753 
End bp622955 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content68% 
IMG OID638151601 
Productaromatic amino acid aminotransferase 
Protein accessionYP_775647 
Protein GI115358509 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1448] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.113714 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGAAC ACATCGACGC GTACCCGGGC GATCCGATCC TGACGCTCAA CGAGAACTTC 
CAGAAAGATC CGCGCGATCA GAAGGTCAAC CTGAGCATCG GCATCTATTT CGATGCAGAA
GGCCGGATTC CCGTGATGGG CGCCGTGCGC GAAGCCGAAA CCGCGCTGCA GCGCGACCTC
GGCCCGAAAC CCTATCTGCC GATGGTCGGC CTCGCCGCGT ATCGCGACGC CGTGCAGGCG
CTCGTGTTCG GCGCCGATCA CCCGGCGCGC GCGGCCGGCC GCATCGCGAC CGTGCAGACG
CTCGGCGGCT CGGGCGCGCT GAAGGTGGGC GCCGATTTCC TGAAGCGCTA CTTCCCGGAC
GCGCAGGTAT GGCTCAGCGA TCCGAGCTGG GAGAACCACC GCTTCATCTT CGAGCGCGCC
GGCTTCACGG TGAACACGTA TCCGTACTAC GACGAAGCGA CGGGCGGCCT GAAGTTCGAC
GCGATGCTCG CGGCGATCGA CGCGCTGCCG GCGCGCAGCA TCGTGCTGCT GCACGCGTGC
TGTCACAACC CGACCGGCGT CGATCTCGAC GAAGGCCAGT GGGAGAAGCT GATCGACGTG
ATCGAGGCGC GCGGGCTGCT GCCGTTCGTC GACATGGCGT ACCAGGGCTT CGGCGCGGGC
CTCGACGCGG ATGCGTTCGC GGTGCGCGAA CTGGCCCGCC GCGGCGTGCC GGCGCTCGTC
GCGAACTCGT TCTCGAAGAA TTTCTCGCTG TACGGCGAGC GGGTCGGCGG CCTGAGCGTC
GTCTGCGAGG ATGCGGCCGC GGCCGAGCGC GTGCTGGGCC AACTGGCCGG CGCGGTGCGC
TCGAACTACA GCAACCCGCA AACCTACGGC GCAAAGGTCG TGGCGACGGT GCTCAACACG
CCGGCGCTGC GCAAGCAGTG GGAAGAAGAG CTTGCCGCGA TGTGCCGCCG CATCGCGCGC
ATGCGCCAGT CGATCCACGA CGGCCTGCGC GACCACGTCA GCGGTGAAGC GCTCACGCGC
TACGTGAAGC AGCGCGGGAT GTTCACGTAC ACGGGCCTGA CCGAAGCCCA GGTCGACGCG
CTGCGCGAAG TGCACGGCGT GTACATCCTG CGTTCGGGCC GCATGTGCGT CGCGGGCCTG
AACGATTCGA ACGTCGGCAT CGTCGCGGAA TCCATCGGCA AGGTGCTGAA GAGCGGCGTC
TGA
 
Protein sequence
MFEHIDAYPG DPILTLNENF QKDPRDQKVN LSIGIYFDAE GRIPVMGAVR EAETALQRDL 
GPKPYLPMVG LAAYRDAVQA LVFGADHPAR AAGRIATVQT LGGSGALKVG ADFLKRYFPD
AQVWLSDPSW ENHRFIFERA GFTVNTYPYY DEATGGLKFD AMLAAIDALP ARSIVLLHAC
CHNPTGVDLD EGQWEKLIDV IEARGLLPFV DMAYQGFGAG LDADAFAVRE LARRGVPALV
ANSFSKNFSL YGERVGGLSV VCEDAAAAER VLGQLAGAVR SNYSNPQTYG AKVVATVLNT
PALRKQWEEE LAAMCRRIAR MRQSIHDGLR DHVSGEALTR YVKQRGMFTY TGLTEAQVDA
LREVHGVYIL RSGRMCVAGL NDSNVGIVAE SIGKVLKSGV