Gene Bamb_3629 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3629 
Symbol 
ID4312525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp468561 
End bp470138 
Gene Length1578 bp 
Protein Length525 aa 
Translation table11 
GC content68% 
IMG OID638151471 
Productmannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 
Protein accessionYP_775517 
Protein GI115358379 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0662] Mannose-6-phosphate isomerase
[COG0836] Mannose-1-phosphate guanylyltransferase 
TIGRFAM ID[TIGR01479] mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.180356 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCC TTCGCCCGGT TCCCGAACCC GAGCTGCCCC GCATCCTGCC CGTCATTCTC 
GCGGGCGGTT CGGGCACGCG GCTCTGGCCG CTGTCGCGCG AGCAGTATCC GAAGCAACTG
ATCGAGCTGA CGTCGAACGA ATCGCCGCTG TCGGCGACCG CGCGCCGGCT GAACGGCATC
GCGAACGCAT CGCTCGGCGA CACGCTGCTG CTGGTGTGCG GCGAACAGCA TCGCATCATG
AGCGCCGCCC AGGTGCTCGG CCGCGCCGCG CCCGCGCGCA TCCTGCTCGA GCCGGCCGCG
CGCAACACGG CACCCGCGCT GACACTCGCG GCGCTCGACG CCAGCGTGCT CGCGGACGAT
CCCGTCCTAG CGGTCATGCC GGCCGATCAC GTGATCGGCG ACGTCGGCGC ATTCCATGAA
GCGATCGGAC GCGCGGCCCG CTACGCGCAG GAAGGCGCGA TCGTCACGCT CGGCGTGCTG
CCGCGCCGCG CGGAAACCGG CTACGGCTAC ATCCAGGTCG GCGAACCGCG CGCGGGCCGA
CTCGGCGGAC AAGGCGGCTA CACGATCGGG CGCTTCGTCG AAAAGCCGAA CGCCGCGCTC
GCCGAGCGCT ACCTGCATTC CGGCGACTAC TGGTGGAACA GCGGCATTTT CGTCACGCGC
GCATCGATCT GGTTGAAGGC GATCCGCGCG CTCGCGCCCG ACATCCATGC GGCCTGCGAT
GCGGCGTGGC GTGCGGGCAT CGCGGAGGAT CCGTTCTTCC GGATCGACGC GGCGGCCTTC
GACGCGTGCC CGGCCGACTC GATCGACTAC GCGGTCATGG AGCGGCTCGC GGAGAGCCCC
GACCTCGGCA TCGAAGGCAT CGTCGTGCCG CTTTCGGCCG GCTGGTCGGA CGTCGGCACC
TGGGATGCGA TCTGGGAAAT CATGCCGAAG GACGATCAGG GCAACGTCGC ACGCGGGCCG
ATCGTGTTCG AGGACACGCA GGACAGTTTC GTGCGCTCGG AAGGCCGGCT GATCGCATGC
GTCGGGATGA AGGACGTCGT CGTGATCGAA ACGCCCGATG CGGTGCTGGT CGCGAACAAG
CACGACGTGC AGCGCGTGAA GAACATCGTC GCGCGCCTGA AGACCGAGCA GCGCCCCCAG
GCGAGCGAGC ACCGCAAGGT GCAGCGGCCG TGGGGACACT ACGATTCGAT CGATCTCGGC
GAGCGGTTCC AGGTGAAGCG GATCGTCGTC GAACCCGGCA AGCAACTGTC GCTGCAAATG
CACTATCACC GCGCCGAGCA CTGGATCGTC GTGCGCGGCA CCGCGAAGGT CACGCGCGGC
AGCGACACGT TCCTGCTCAG CGAAAACGAA TCGACCTACA TTGCCGTCGG CGAGGTCCAT
CGGCTCGAGA ATCCCGGCCG GATCCCGCTC GAGATCATCG AGGTGCAGTC GGGCGACTAT
CTCGGCGAAG ACGATATCGT GCGGTTCGAC GATCGGTATG GACGGCCGGT CGTCGATTCC
GCGCAGCCGG CGCCACGTTC ACCGTGCGAG CCTGACGAGC CGCAGGAGGA AGCGGCGGAA
CGGGACGCCG TTCGATAG
 
Protein sequence
MTTLRPVPEP ELPRILPVIL AGGSGTRLWP LSREQYPKQL IELTSNESPL SATARRLNGI 
ANASLGDTLL LVCGEQHRIM SAAQVLGRAA PARILLEPAA RNTAPALTLA ALDASVLADD
PVLAVMPADH VIGDVGAFHE AIGRAARYAQ EGAIVTLGVL PRRAETGYGY IQVGEPRAGR
LGGQGGYTIG RFVEKPNAAL AERYLHSGDY WWNSGIFVTR ASIWLKAIRA LAPDIHAACD
AAWRAGIAED PFFRIDAAAF DACPADSIDY AVMERLAESP DLGIEGIVVP LSAGWSDVGT
WDAIWEIMPK DDQGNVARGP IVFEDTQDSF VRSEGRLIAC VGMKDVVVIE TPDAVLVANK
HDVQRVKNIV ARLKTEQRPQ ASEHRKVQRP WGHYDSIDLG ERFQVKRIVV EPGKQLSLQM
HYHRAEHWIV VRGTAKVTRG SDTFLLSENE STYIAVGEVH RLENPGRIPL EIIEVQSGDY
LGEDDIVRFD DRYGRPVVDS AQPAPRSPCE PDEPQEEAAE RDAVR